Alternatives and similar repositories for hs2p:

Users that are interested in hs2p are comparing it to the libraries listed below

• clemsgrs / hipt
  Re-implementation of HIPT
  ☆19Updated 2 months ago
• MWod / DeeperHistReg
  DeeperHistReg - Source Code
  ☆46Updated 9 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆51Updated 2 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆93Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆59Updated this week
• vqdang / H2T
  ☆36Updated 2 years ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆68Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆57Updated 4 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆66Updated 2 years ago
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆28Updated 9 months ago
• mahmoodlab / PANTHER
  Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024
  ☆115Updated this week
• wenqi006 / SlideGraph
  ☆52Updated 3 years ago
• cwlkr / torchvahadane
  Gpu accelerated vahadane stain normalization for Digital Pathology workflows.
  ☆23Updated 11 months ago
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆48Updated 2 months ago
• mahmoodlab / Patch-GCN
  Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
  ☆138Updated 9 months ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆92Updated 3 months ago
• mahmoodlab / MMP
  Multimodal prototyping for cancer survival prediction - ICML 2024
  ☆69Updated this week
• Paige-AI / paige-ml-sdk
  This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…
  ☆36Updated 6 months ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆88Updated this week
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆24Updated last year
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆32Updated last year
• Xiyue-Wang / RetCCL
  ☆96Updated last year
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆95Updated 3 weeks ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆30Updated 2 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆54Updated 2 weeks ago
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆97Updated 3 weeks ago
• liupei101 / Pipeline-Processing-TCGA-Slides-for-MIL
  This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.
  ☆60Updated 2 months ago
• mahmoodlab / TANGLE
  Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024
  ☆92Updated 4 months ago
• Biooptics2021 / PathFinder
  ☆49Updated last year