An R package for the analysis and interpretation of cell migration tracks.
☆15Sep 19, 2025Updated 9 months ago
Alternatives and similar repositories for celltrackR
Users that are interested in celltrackR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- co-expressed gene-set enrichment analysis☆13Nov 20, 2023Updated 2 years ago
- Aligning images acquired with the IBEX microscopy imaging technique☆20Jun 21, 2026Updated last week
- Interacting Active Surfaces☆10Jul 12, 2022Updated 3 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 3 months ago
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆44Oct 10, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆15Jun 4, 2023Updated 3 years ago
- ☆11Feb 18, 2023Updated 3 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 8 months ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- This is an older version of cytosim, a cytoskeleton simulation engine☆29Nov 2, 2021Updated 4 years ago
- Implementations of gradKCCA☆16Feb 16, 2024Updated 2 years ago
- Image Mass Cytometry analysis pipeline☆26Jun 3, 2025Updated last year
- Framework for image and flow cytometry analysis☆33Mar 17, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 3 years ago
- ☆12Jun 29, 2021Updated 5 years ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Feb 13, 2021Updated 5 years ago
- Trends in scientific publishing delays☆11Aug 20, 2021Updated 4 years ago
- ☆26Apr 3, 2019Updated 7 years ago
- Advanced Coarse-Grained Membrane Simulation☆17Jun 16, 2026Updated 2 weeks ago
- ☆20Sep 4, 2023Updated 2 years ago
- An epithelium simulation library☆67Feb 4, 2026Updated 5 months ago
- Utilities for importing FEM meshes to Mathematica☆15Apr 20, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- elliptical fourier descriptors with and without lobe contributions☆13Sep 15, 2020Updated 5 years ago
- Tutorial on "Simulations of pattern formation in biological cells"☆13Apr 18, 2025Updated last year
- Framework for Independent R shiny☆16Jun 2, 2026Updated last month
- (Old) Fast Iterative Digital Image Correlation Algorithm☆12Apr 27, 2018Updated 8 years ago
- ImageJ plugin for neurite tracing and analysis☆14Mar 19, 2020Updated 6 years ago
- Show me my GitHub contributions!☆10Mar 13, 2024Updated 2 years ago
- Using Biopython's Bio.Entrez package to Access NCBI Entrez databases☆16Jun 26, 2014Updated 12 years ago
- Analysis of TrackMate XML outputs in R☆17Mar 7, 2026Updated 3 months ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆27Jul 14, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- neural network for obtaining binarized mask for objects in grayscale images☆14Sep 11, 2020Updated 5 years ago
- Simulate biological cells☆22Oct 23, 2025Updated 8 months ago
- CMCI textbook 2, for ImageJ macro course☆19Nov 6, 2017Updated 8 years ago
- Homebrew tap for formulae to build ARB (http://www.arb-home.de) and related software.☆14May 22, 2026Updated last month
- 3D Traction Force Microscopy with Python. Calculate cell-generated forces in collagen or other (nonlinear) biopolymer networks.☆17Jun 26, 2026Updated last week
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 3 years ago
- Mathematica notebook and resources for the post "Eigenfaces"☆22Jun 9, 2020Updated 6 years ago