Borda / BIRLLinks
BIRL: Benchmark on Image Registration methods with Landmark validations
☆93Updated 3 years ago
Alternatives and similar repositories for BIRL
Users that are interested in BIRL are comparing it to the libraries listed below
Sorting:
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Dataset: landmarks for registration of histology images☆34Updated 4 years ago
- DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration☆46Updated 5 years ago
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆78Updated 3 years ago
- WSICS☆30Updated 6 years ago
- Image registration using pytorch☆184Updated last year
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆110Updated 5 years ago
- an image registration/augmentation/segmentation package☆174Updated 2 years ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆52Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- ☆195Updated 5 years ago
- Software used by the AGH team during the ANHIR challenge.☆28Updated 4 years ago
- pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis☆61Updated 11 months ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆257Updated 2 months ago
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆49Updated 3 years ago
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)☆51Updated 5 years ago
- Code used to create the DeepHistReg submission to the ANHIR challenge.☆31Updated 7 months ago
- Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: h…☆193Updated last year
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆74Updated 10 months ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆172Updated 5 months ago
- Medical Image Radiomics Processor☆73Updated this week
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated 2 years ago
- ☆15Updated 6 years ago
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- ☆92Updated 5 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆139Updated last year
- A curated list of resources for 3D segmentation of neurites in EM images☆55Updated last year
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 5 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Updated 2 years ago