Borda / BIRLLinks
BIRL: Benchmark on Image Registration methods with Landmark validations
☆93Updated 3 years ago
Alternatives and similar repositories for BIRL
Users that are interested in BIRL are comparing it to the libraries listed below
Sorting:
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Dataset: landmarks for registration of histology images☆32Updated 4 years ago
- Interactive Segmentation of Nucleus☆63Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆73Updated 3 years ago
- WSICS☆30Updated 6 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆108Updated 5 years ago
- Image registration using pytorch☆182Updated 11 months ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Updated 2 years ago
- DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration☆46Updated 5 years ago
- Code used to create the DeepHistReg submission to the ANHIR challenge.☆31Updated 3 months ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 6 months ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆49Updated 2 years ago
- ☆88Updated last month
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆243Updated 2 weeks ago
- Image, point set, and surface registration in PyTorch.☆30Updated 7 months ago
- Software used by the AGH team during the ANHIR challenge.☆27Updated 4 years ago
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆77Updated 2 years ago
- ☆192Updated 5 years ago
- an image registration/augmentation/segmentation package☆171Updated 2 years ago
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆29Updated 3 years ago
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆48Updated 2 years ago
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆49Updated last year
- PyTorch implementation of HighRes3DNet☆54Updated last year
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆69Updated 2 years ago
- A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Regist…☆57Updated 2 years ago
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆20Updated 4 years ago
- Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: h…☆190Updated last year