Must-read papers on deep learning based methodology paper for single cell data analysis
☆19Apr 18, 2021Updated 5 years ago
Alternatives and similar repositories for awesome-AI4SingleCell
Users that are interested in awesome-AI4SingleCell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Scripts associated with the 2023 Open Problems competition☆11Nov 23, 2023Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. TOmicsVis — Transcriptome Visualization Process Scheme. Homepage: https://…☆16Aug 28, 2023Updated 2 years ago
- Critical downstream analysis steps for single-cell RNA sequencing data☆13Feb 21, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PDBClean helps create a curated ensemble of molecular structures☆18May 19, 2026Updated last week
- Placeholder for code of BSP.☆11Aug 13, 2021Updated 4 years ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Apr 4, 2022Updated 4 years ago
- Integrative protein sequence design with evolutionary multiobjective optimization.☆13Jul 16, 2024Updated last year
- Two-Dimensional Template Matching implemented in Python☆16Apr 27, 2026Updated last month
- an easy deindex tool for illumina multiple barcodes sequencing☆12Jul 30, 2015Updated 10 years ago
- ☆35Jun 7, 2019Updated 6 years ago
- Code for the combinatorial synthesis library variational auto-encoder (CSLVAE) as described in the paper, "An efficient graph generative …☆14Nov 17, 2023Updated 2 years ago
- My implementation (PyTorch) for the paper SST: Single-Stream Temporal Action Proposals (http://vision.stanford.edu/pdf/buch2017cvpr.pdf).☆10Dec 8, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated 2 weeks ago
- An R package for creating 3D barplots☆12Jan 8, 2023Updated 3 years ago
- 2019 single cell RNA sequencing Workshop @ UCD AND UCSF☆17Nov 25, 2019Updated 6 years ago
- scNMT-seq gastrulation☆42Feb 8, 2023Updated 3 years ago
- ☆18Sep 23, 2024Updated last year
- Unbiased single-cell transcriptomic data cell type identification☆15May 7, 2024Updated 2 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆13Oct 16, 2025Updated 7 months ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- websocket-benchmark☆11May 27, 2021Updated 5 years ago
- spatial transcriptome, single cell☆75Mar 18, 2023Updated 3 years ago
- sci palettes for matplotlib/seaborn☆10Feb 14, 2022Updated 4 years ago
- Evaluation measures for the EPIC-KITCHENS-100 Action Detection challenge☆16Feb 10, 2026Updated 3 months ago
- A Teaching Engine for Genomics☆12Mar 21, 2021Updated 5 years ago
- CRUK Bioinformatics Workshop September 2017☆18Sep 21, 2017Updated 8 years ago
- ☆14Jan 27, 2024Updated 2 years ago
- Causal discovery of gene regulatory programs from single-cell genomics☆19Sep 5, 2025Updated 8 months ago
- Code for "Learning with minibatch Wasserstein: asymptotic and gradient properties".☆13Apr 9, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- code for composite in situ imaging (cisi) analysis☆12Oct 26, 2020Updated 5 years ago
- Pipeline for SpatialTranscriptomics and 10X Visium data☆22Jul 22, 2025Updated 10 months ago
- 大批量稳定的获取ChatGPT登录的AccessToken，同时增加静态住宅IP代理池。保证批量启动GPT-4服务时，AccessToken增加缓存时间和过期时间校验。☆14Jul 5, 2023Updated 2 years ago
- Base CRUK Cambridge Institute RNAseq Course☆21Aug 30, 2019Updated 6 years ago
- Lightweight C++ library for reading FASTA and FASTQ files.☆11Feb 16, 2019Updated 7 years ago
- Builds a PEP from SRA or GEO accessions☆54Apr 12, 2026Updated last month
- A dark green-yellow DuoTone syntax theme☆14May 29, 2017Updated 9 years ago