ronakvijay / Protein_Sequence_ClassificationLinks
A case study on Pfam dataset to classify protein families.
☆32Updated 6 years ago
Alternatives and similar repositories for Protein_Sequence_Classification
Users that are interested in Protein_Sequence_Classification are comparing it to the libraries listed below
Sorting:
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆28Updated 5 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆74Updated 4 years ago
- A Prot paper related materials☆10Updated 3 years ago
- A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences☆97Updated 3 years ago
- Protein sequence classification with self-supervised pretraining☆82Updated 4 years ago
- ☆48Updated 11 months ago
- Tutorial for "Advances in machine learning for molecules" (for Summer School for Machine Learning in Bioinformatics, https://cs.hse.ru/ss…☆21Updated 5 years ago
- ☆25Updated 3 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆41Updated 2 years ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆74Updated 2 years ago
- ☆26Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 3 years ago
- A Python package for extracting protein sequence features☆63Updated 3 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 2 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆31Updated 3 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆106Updated last week
- Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinfor…☆22Updated 4 years ago
- TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism☆25Updated 4 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.☆30Updated 4 months ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 3 years ago
- ☆36Updated 2 years ago
- DeepGO with Fuzzy DL☆30Updated 3 years ago
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 3 years ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21Updated 3 years ago
- Feature Extraction Package for Biological Sequences☆65Updated 3 weeks ago
- Supplementary data for the ACME algorithm☆23Updated 3 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Updated 5 years ago