Alternatives and similar repositories for A_Prot_Paper

Users that are interested in A_Prot_Paper are comparing it to the libraries listed below

• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆16Updated last year
• sinc-lab / anc2vec
  Method for constructing embeddings of GO terms.
  ☆14Updated 3 years ago
• psp3dcg / LightRoseTTA
  The official pytorch implementation of "LightRoseTTA: High-efficient and Accurate Protein Structure Prediction Using an Ultra-Lightweight…
  ☆15Updated last month
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆39Updated last week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• amyxlu / CPCProt
  Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.
  ☆29Updated 4 years ago
• ba-lab / disteval
  DISTEVAL: A web-server for evaluating protein inter-residue distances
  ☆18Updated 3 years ago
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago
• AspirinCode / iPPIGAN
  De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors
  ☆20Updated 6 months ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆24Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆19Updated last year
• compbiomed-unito / acdc-nn
  ☆21Updated 2 years ago
• Furman-Lab / PatchMAN
  ☆26Updated last week
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆33Updated last month
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆27Updated 4 years ago
• Zimiao1025 / BioSeq-BLM
  BioSeq-BLM: a platform for analyzing DNA, RNA and protein sequences based on biological language models
  ☆13Updated 2 years ago
• haddocking / prodigy-lig
  Prediction of Protein-Small molecule binding affinities
  ☆16Updated 7 months ago
• aedera / anc2vec
  Unsupervised neural network for learning embeddings of GO terms.
  ☆18Updated 3 years ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆36Updated 3 months ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• jas-preet / SPOT-1D-Single
  The standalone version of SPOT-1D-Single available for public use for research purposes.
  ☆23Updated 11 months ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 5 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆38Updated 2 weeks ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆33Updated 4 years ago
• yanzhanglab / Graph2GO
  Graph-based representation learning method for protein function prediction
  ☆24Updated 4 years ago
• gozsari / ProtFeat
  ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.
  ☆20Updated 8 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆44Updated 4 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆55Updated last year