SurGen: 1020 H&E-stained Whole Slide Images With Survival and Genetic Markers
☆19Nov 2, 2025Updated 4 months ago
Alternatives and similar repositories for SurGen-Dataset
Users that are interested in SurGen-Dataset are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- Framework for Deep Speech Recognition☆11Nov 22, 2022Updated 3 years ago
- ☆14Feb 11, 2020Updated 6 years ago
- Pan-cancer tils analysis study by Hongming Xu☆14Oct 29, 2020Updated 5 years ago
- Repository of the paper: "Histo-Miner: Tissue Features Extraction With Deep Learning from H&E Images of Squamous Cell Carcinoma Skin Canc…☆20Mar 11, 2026Updated last week
- Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image☆11Jun 2, 2022Updated 3 years ago
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆22Oct 1, 2025Updated 5 months ago
- Course Data Analysis for Life Sciences based on the material by Rafael Irizarry & Mike Love☆19Jun 3, 2020Updated 5 years ago
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Apr 15, 2022Updated 3 years ago
- Official Pytorch implementation of "Patch-wise Graph Contrastive Learning for Image Translation" (AAAI 2024)☆14Feb 20, 2024Updated 2 years ago
- ☆12May 16, 2019Updated 6 years ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆24Jan 5, 2023Updated 3 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- ☆17Sep 20, 2022Updated 3 years ago
- ☆12Mar 1, 2026Updated 3 weeks ago
- CRsAE (constrained recurrent sparse autoencoder)☆15Oct 29, 2025Updated 4 months ago
- ☆14Oct 29, 2018Updated 7 years ago
- Official implementation of AAAI25 "Unpaired Multi-Domain Histopathology Virtual Staining using Dual Path Prompted Inversion"☆29Apr 17, 2025Updated 11 months ago
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Jul 16, 2025Updated 8 months ago
- ☆32Jul 5, 2025Updated 8 months ago
- Demographic bias in misdiagnosis by computational pathology models - Nature Medicine☆14Apr 29, 2024Updated last year
- D. E. Shaw Research Technical Reports☆13Jul 4, 2022Updated 3 years ago
- ☆46Jan 10, 2022Updated 4 years ago
- ☆23Aug 17, 2025Updated 7 months ago
- The implement for Comparison Detector: Convolutional Neural Networks for Cervical Cell Detection in the Limited-data Scenario.☆12Sep 6, 2022Updated 3 years ago
- LLM for genomic☆14Feb 23, 2024Updated 2 years ago
- LLM App with Web Search for YouTube video 🎥☆30Feb 9, 2025Updated last year
- Pathology Foundation Model - Nature Medicine☆692Mar 26, 2025Updated 11 months ago
- ☆18Nov 16, 2023Updated 2 years ago
- Python and ImageJ scripts designed to track single cells and analyze fluorescence☆15Dec 16, 2021Updated 4 years ago
- [MICCAI 2024]Official implementation of "Pathological Semantics-Preserving Learning for H&E-to-IHC Virtual Staining"☆41Nov 20, 2025Updated 4 months ago
- Cell tracking using TensorFlow and BayesianTracker☆22Jan 17, 2022Updated 4 years ago
- SONNET: A self-guided ordinal regression neural network for segmentation and classification of nuclei in large-scale multi-tissue histolo…☆17Sep 15, 2021Updated 4 years ago
- Hibou: Foundational Models for Pathology☆76Oct 23, 2024Updated last year
- Example of Acquisition of the GPS C/A code☆11May 19, 2019Updated 6 years ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- ☆19Jan 17, 2024Updated 2 years ago
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Oct 21, 2016Updated 9 years ago
- Feature extraction from GEOJson nuclei and tissue segmentation maps☆19Jun 23, 2025Updated 9 months ago