Alternatives and similar repositories for hhsuite2

Users that are interested in hhsuite2 are comparing it to the libraries listed below

• realbigws / Predict_Property
  Predict protein local properties using sequence or profile information.
  ☆23Updated 5 years ago
• realbigws / TGT_Package
  Generate A3M and TGT file from a given sequence in FASTA format.
  ☆11Updated 5 years ago
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆60Updated 4 years ago
• liudan111 / PLM-interact
  PLM-interact: extending protein language models to predict protein-protein interactions.
  ☆58Updated 5 months ago
• biomed-AI / GraphBepi
  ☆13Updated 2 years ago
• SNU-CSSB / RF2-Lite
  ☆32Updated last year
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆62Updated 5 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆91Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆77Updated 4 months ago
• LinearFold / LinearPartition
  Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities
  ☆33Updated last year
• dina-lab3D / CombFold
  ☆91Updated last year
• leeyang / ResPRE
  ResPRE is an algorithm for protein residue-residue contact-map prediction
  ☆21Updated 6 years ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆118Updated 2 weeks ago
• fusong-ju / ProFOLD
  A protein 3D structure prediction application
  ☆67Updated 4 years ago
• spetti / SMURF
  ☆135Updated 3 years ago
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆122Updated 4 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆58Updated 3 years ago
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆72Updated 2 years ago
• sameerkhurana10 / DSOL_rv0.2
  deep protein solubility prediction
  ☆40Updated 6 years ago
• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆70Updated 3 years ago
• alex-hh / deep-protein-generation
  ☆60Updated 3 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆61Updated last year
• idptools / metapredict
  A machine learning based protein disorder predictor.
  ☆27Updated 3 months ago
• melobio / EvoPlay
  ☆76Updated 2 years ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆173Updated 9 months ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆81Updated 2 years ago
• westlake-repl / Evolla
  ProteinChat: A frontier protein-language generative model designed to decode the molecular language of proteins.
  ☆61Updated 10 months ago
• kad-ecoli / pdb2fasta
  implementing PDB to FASTA file format conversion in multiple languages
  ☆21Updated 8 years ago
• biofold / ddgun
  predict stability change upon mutation
  ☆30Updated last year