kad-ecoli / hhsuite2Links
A fork for the old hhsuite-2.0.16
☆12Updated 4 years ago
Alternatives and similar repositories for hhsuite2
Users that are interested in hhsuite2 are comparing it to the libraries listed below
Sorting:
- Predict protein local properties using sequence or profile information.☆23Updated 4 years ago
 - De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 3 years ago
 - ☆133Updated 3 years ago
 - PLM-interact: extending protein language models to predict protein-protein interactions.☆41Updated 2 months ago
 - ☆11Updated 2 years ago
 - Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆30Updated last year
 - ☆30Updated last year
 - PLMSearch enables accurate and fast homologous protein search with only sequences as input☆74Updated last month
 - ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 6 years ago
 - A protein 3D structure prediction application☆67Updated 4 years ago
 - Fast protein structure searching or your money back☆114Updated 3 weeks ago
 - Generate A3M and TGT file from a given sequence in FASTA format.☆11Updated 4 years ago
 - Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
 - Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
 - implementing PDB to FASTA file format conversion in multiple languages☆20Updated 8 years ago
 - AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated 2 months ago
 - deep protein solubility prediction☆40Updated 6 years ago
 - Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆35Updated 2 months ago
 - PSIPRED Protein Secondary Structure Predictor☆58Updated 4 months ago
 - ☆87Updated last year
 - Repository for publicly available deep learning models developed in Rosetta community☆119Updated 4 years ago
 - Fast and accurate protein structure prediction☆56Updated 9 months ago
 - ☆48Updated 11 months ago
 - pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆29Updated last year
 - Deep learning prediction of CRISPR-Cas PAM specificity☆12Updated 9 months ago
 - ☆59Updated 2 years ago
 - Evolutionary velocity with protein language models☆94Updated 2 years ago
 - An evolutionary context-integrated deep learning framework for protein engineering☆65Updated 3 years ago
 - GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆62Updated last year
 - Fully convolutional neural networks for protein residue-residue contact prediction☆43Updated 6 years ago