multicom-toolbox / CONFOLDLinks
Contact-based protein structure prediction
☆10Updated 6 years ago
Alternatives and similar repositories for CONFOLD
Users that are interested in CONFOLD are comparing it to the libraries listed below
Sorting:
- Improved ab initio protein structure reconstruction☆15Updated 7 years ago
- Contact map alignment☆41Updated 4 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Physical energy function for protein sequence design☆33Updated 2 years ago
- Fast, accurate, and deterministic protein side-chain packing☆36Updated 7 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Conversion of PDBx/mmCIF files to best effort/minimal PDB files☆23Updated 11 months ago
- Protein structure descriptors and alignment based on 3D Zernike moments.☆38Updated last year
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆57Updated 3 years ago
- DLPacker☆31Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆93Updated 4 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆39Updated 10 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆39Updated 4 years ago
- ☆50Updated 2 years ago
- Real-time structure motif searching in protein 3D structures using an inverted index strategy☆14Updated 3 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆97Updated 2 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆86Updated last year
- ☆29Updated 5 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago
- ☆21Updated last year
- PyDock Tutorial☆34Updated 7 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆59Updated last week
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆42Updated last month
- ☆27Updated last week