rcsb / rcsb-saguaro-3dLinks
☆30Updated last month
Alternatives and similar repositories for rcsb-saguaro-3d
Users that are interested in rcsb-saguaro-3d are comparing it to the libraries listed below
Sorting:
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆29Updated last year
- MMseqs2 app to run on your workstation or servers☆87Updated this week
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated last year
- 1D Feature Viewer☆51Updated 2 months ago
- MOLeculAR structure annoTator☆34Updated 9 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆37Updated 2 years ago
- Fast protein structure searching or your money back☆108Updated 3 months ago
- Fast and accurate protein structure prediction☆53Updated 6 months ago
- A Python package for mapping sequence aligned data onto protein structures☆35Updated 4 years ago
- Evolutionary conservation estimation of residues or nucleotides☆45Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆40Updated 4 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆28Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆30Updated 2 years ago
- Comprehensive Python client for the Uniprot REST API☆50Updated last month
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆17Updated 3 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated this week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆89Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆55Updated 3 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- Predict the structure of immune receptor proteins☆51Updated 8 months ago
- Singularity recipe for AlphaFold☆36Updated 8 months ago
- Protein 3D structure prediction pipeline☆82Updated last week
- Transmembrane proteins predicted through Language Model embeddings☆37Updated 2 months ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆58Updated 4 months ago
- PSIPRED Protein Secondary Structure Predictor☆57Updated 2 weeks ago
- Generates images from mmCIF/BCIF files☆40Updated last month
- a pipeline to build similarity maps of protein space☆35Updated 7 months ago
- Diverse Genomic Embedding Benchmark☆46Updated 3 months ago