Eterna100-V2 benchmarking results and scripts
☆13Oct 21, 2025Updated 5 months ago
Alternatives and similar repositories for eterna100-benchmarking
Users that are interested in eterna100-benchmarking are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Differentiable RNA folding in JAX☆27Mar 25, 2025Updated 11 months ago
- End-to-end RNA Design using deep reinforcement learning☆72Sep 26, 2022Updated 3 years ago
- MCTS-RNA is a computational tool for solving RNA inverse folding problem with controlling the GC-content of the RNA sequence very precise…☆12Apr 3, 2017Updated 8 years ago
- ☆28Oct 3, 2023Updated 2 years ago
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆18May 9, 2023Updated 2 years ago
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆19Jul 11, 2024Updated last year
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆22Sep 17, 2018Updated 7 years ago
- Python module to manipulate and visualize minimap2's cs tag☆11Jul 28, 2024Updated last year
- ☆12Dec 2, 2022Updated 3 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆34May 24, 2024Updated last year
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆15May 20, 2022Updated 3 years ago
- ☆23Dec 21, 2022Updated 3 years ago
- A heterogeneous OpenCL implementation of QuickVina2☆17Jan 7, 2023Updated 3 years ago
- Optimizing blood-brain barrier permeation through Deep Reinforcement Learning for de novo drug design☆14Apr 22, 2021Updated 4 years ago
- Repository for Fall 2019 incarnation of Bayesian Statistics at Carleton College.☆13Mar 16, 2021Updated 5 years ago
- TSCoDe is a systematical conformational embedder for small molecules. It helps computational chemists build transition states and binding…☆13Jan 6, 2025Updated last year
- ☆20May 28, 2024Updated last year
- Support vector machines implemented from scratch in Python.☆14Sep 16, 2025Updated 6 months ago
- Nucleic acid sequence designer☆12Updated this week
- Repository for mRNA Paper and CodonBERT publication.☆142Jun 12, 2024Updated last year
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆21Feb 21, 2025Updated last year
- Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics☆18Jan 6, 2026Updated 2 months ago
- Soccer Trajectory Prediction Competition☆16Aug 28, 2025Updated 6 months ago
- A deep learning method for the prediction of internal ribosome entry sites (IRES) of circRNAs☆17Jul 6, 2025Updated 8 months ago
- Proof-of-concept Typst webapp alternative☆22May 7, 2024Updated last year
- State of the art software for RNA sequence design. The first to solve the Eterna benchmark!☆16Jul 17, 2024Updated last year
- Parallel solution for local RNA secondary structure analysis☆12Feb 14, 2023Updated 3 years ago
- Optimizing Hyperparameters with Conformal Quantile Regression☆10May 22, 2023Updated 2 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆66Jul 17, 2024Updated last year
- ☆25Mar 6, 2026Updated 2 weeks ago
- Tool (with GUI) for easy downloading of lecture slides and other material from blackboard at Curtin☆18Mar 9, 2017Updated 9 years ago
- H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021☆10Jan 24, 2026Updated 2 months ago
- Rapid mining of RNA structure motifs from profiling data.☆14Oct 20, 2021Updated 4 years ago
- The ViennaRNA Package☆389Feb 24, 2026Updated last month
- ☆23Dec 9, 2025Updated 3 months ago
- Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, b…☆11Dec 8, 2022Updated 3 years ago
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆122Apr 7, 2024Updated last year
- Code for the Framepool model☆14Feb 1, 2025Updated last year
- [NeurIPS 2022] Supervising the Multi-Fidelity Race of Hyperparameter Configurations☆13Apr 25, 2023Updated 2 years ago