Alternatives and similar repositories for nmfgpu:

Users that are interested in nmfgpu are comparing it to the libraries listed below

• YeWenting / sGLMM
  Implementation for sGLMM (Sparse graph-structured linear mixed model)
  ☆15Updated last year
• VCCRI / CIDR
  Clustering through Imputation and Dimensionality Reduction
  ☆62Updated 7 years ago
• mravanba / BooleanFactorization
  Boolean matrix factorization and noisy completion by message passing
  ☆11Updated 8 years ago
• rezacsedu / Convolutional-embedded-networks
  Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing
  ☆11Updated 5 years ago
• ushaham / BatchEffectRemoval
  ☆55Updated 4 years ago
• yanailab / knn-smoothing
  K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data
  ☆53Updated 2 years ago
• wang-research / VASC
  Variational autoencoder for single cell RNA-seq datasets
  ☆44Updated 7 years ago
• TammoR / LogicalFactorisationMachines
  ☆21Updated 5 years ago
• wenjiegroup / PEDLA
  PEDLA: predicting enhancers with deep learning-based algorithmic framework
  ☆16Updated 9 years ago
• greenelab / adage
  Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …
  ☆61Updated 8 years ago
• brc7 / DiversitySampling
  ☆9Updated 2 years ago
• ratschlab / graph_annotation
  Code accompanying the publication for compressed graph annotation
  ☆13Updated 5 years ago
• mehmetgonen / bmtmkl
  Bayesian Multitask Multiple Kernel Learning
  ☆18Updated 6 years ago
• BatzoglouLabSU / SIMLR
  Implementations in both Matlab and R of the SIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/n…
  ☆110Updated 3 months ago
• SUwonglab / CoupledNMF
  Coupled clustering of single cell genomic data
  ☆12Updated 3 years ago
• QData / GaKCo-SVM
  ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting
  ☆14Updated 5 years ago
• stephenslab / rss
  RSS: Regression with Summary Statistics
  ☆50Updated 4 months ago
• PMBio / limix
  We have moved to https://github.com/limix/limix.
  ☆24Updated 7 years ago
• harvardnlp / regulatory-prediction
  Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…
  ☆28Updated 7 years ago
• AltschulerWu-Lab / scScope
  ☆49Updated 5 years ago
• yifeng-li / DECRES
  Deep learning for identifying cis-regulatory elements and other applications
  ☆33Updated 8 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 5 years ago
• Dongwon-Lee / lsgkm
  ☆50Updated last year
• ppsp-team / StratiPy
  Graph regularized nonnegative matrix factorization (GNMF) in Python
  ☆45Updated 4 years ago
• lingxuez / URSM
  A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.
  ☆11Updated 7 years ago
• davidaknowles / eagle
  An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…
  ☆21Updated 3 years ago
• ManchesterBioinference / GrandPrix
  GrandPrix
  ☆16Updated 5 years ago
• lorinanthony / RATE
  Code for Variable Selection in Black Box Methods with RelATive cEntrality (RATE) Measures
  ☆19Updated 4 years ago
• mzwiessele / topslam
  manifold metric and correction techniques for (Bayesian) GPLVM from GPy
  ☆12Updated 4 years ago
• daquang / YAMDA
  Yet Another Motif Discovery Algorithm
  ☆52Updated 6 years ago