Alternatives and similar repositories for IDSL_MINT

Users that are interested in IDSL_MINT are comparing it to the libraries listed below

• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆19Updated last year
• zhengfj1994 / PPGB_MS2
  ☆11Updated last year
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆24Updated last year
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆16Updated 2 months ago
• pnnl / MSAC
  ☆23Updated 10 months ago
• murphy17 / graff-ms
  Efficiently predicting high resolution mass spectra with graph neural networks
  ☆32Updated 2 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆15Updated 2 years ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆59Updated last month
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated 2 years ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆34Updated 4 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆13Updated last week
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆17Updated last year
• broadinstitute / bmxp
  The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …
  ☆13Updated 2 months ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• neilswainston / FragGenie
  ☆15Updated 4 years ago
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆71Updated last week
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated last month
• sirius-ms / sirius-client-openAPI
  OpenAPI based libraries for different programming languages like R and Python
  ☆18Updated last week
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated last year
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆19Updated 2 years ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆34Updated 2 years ago
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆72Updated last year
• lucinamay / biosynfoni
  a *biosynformatic* fingerprint to explore natural product distance and diversity
  ☆20Updated 5 months ago
• pnnl / darkchem
  ☆33Updated last year
• biorack / blink
  ☆12Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆20Updated 2 years ago
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆15Updated last month
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆32Updated last week
• oolonek / ISDB
  A database of In-Silico predicted MS/MS spectrum of Natural Products
  ☆15Updated 3 years ago