Alternatives and similar repositories for IDSL_MINT

Users that are interested in IDSL_MINT are comparing it to the libraries listed below

• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆18Updated 9 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆22Updated 8 months ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆15Updated 2 weeks ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆33Updated 3 years ago
• zhengfj1994 / PPGB_MS2
  ☆10Updated 8 months ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆14Updated 2 years ago
• pnnl / MSAC
  ☆23Updated 4 months ago
• neilswainston / FragGenie
  ☆15Updated 4 years ago
• mandelbrot-project / pf_1600_datanote
  This repository gathers scripts used for the paper "Open and re-usable annotated mass spectrometry dataset of a chemodiverse collection o…
  ☆9Updated 2 years ago
• oolonek / ISDB
  A database of In-Silico predicted MS/MS spectrum of Natural Products
  ☆15Updated 2 years ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 8 months ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆52Updated 2 weeks ago
• murphy17 / graff-ms
  Efficiently predicting high resolution mass spectra with graph neural networks
  ☆27Updated 2 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆29Updated 5 months ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆28Updated 3 weeks ago
• lucinamay / biosynfoni
  a *biosynformatic* fingerprint to explore natural product distance and diversity
  ☆18Updated last month
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• sirius-ms / sirius-client-openAPI
  openAPI (swagger-condegen) based libraries for different programming languages like R, Python and Ruby
  ☆15Updated last week
• huaxuyu / masscube
  ☆17Updated 2 weeks ago
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆67Updated 2 weeks ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated 2 years ago
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆17Updated last year
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆13Updated 3 weeks ago
• dimenwarper / molxspec
  ML models to convert molecules to ESI mass spectra and maybe back again
  ☆9Updated 3 years ago
• iomega / spec2vec_gnps_data_analysis
  Analysis and benchmarking of mass spectra similarity measures using gnps data set.
  ☆24Updated 3 years ago
• mwang87 / NP-Classifier
  ☆25Updated last month
• pnnl / deimos
  ☆35Updated 2 months ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated last year