TurtleTools / alphafold-structural-spaceLinks
Structural space exploration of AlphaFold DB
☆12Updated 3 years ago
Alternatives and similar repositories for alphafold-structural-space
Users that are interested in alphafold-structural-space are comparing it to the libraries listed below
Sorting:
- ☆30Updated 3 months ago
- Protein common interface databases☆10Updated 6 years ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Updated last week
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- Foldy: a web-based platform for interactive protein structure analysis☆23Updated 3 weeks ago
- Python package to manage protein structures and their annotations☆43Updated last year
- A program fror inter-protein contact prediction from structures of interacting proteins☆19Updated last year
- A Unified Approach to Protein Engineering☆42Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆30Updated last year
- 2D portraits of 3D protein structures☆23Updated 4 months ago
- ESM-driven Pocket Cross Similarity☆13Updated 2 weeks ago
- ML toolset for creating TED: The Encyclopedia of Domains☆21Updated 3 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Fragment binding prediction with ColabFold☆36Updated 5 months ago
- Clusters protein chains based on CA distance difference☆15Updated 6 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated 11 months ago
- The DSSP building software☆47Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Updated 4 years ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆33Updated 4 months ago
- MEGADOCK on Google Colaboratory☆17Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- Python interface for the RCSB search API.☆20Updated last year
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 8 months ago
- Machine learning prediction of enzyme optimum pH☆44Updated 4 months ago
- some tools for working with protein (PDB) files in tensorflow☆11Updated 6 years ago
- Machine learning-driven antibody design☆60Updated 2 years ago
- Kuhlman Lab Installation of AlphaFold3☆30Updated 3 months ago