SaadUllahAkram / CellTracker
(Biological) Cell Tracker for Microscopy Image Analysis
☆14Updated 8 years ago
Alternatives and similar repositories for CellTracker
Users that are interested in CellTracker are comparing it to the libraries listed below
Sorting:
- This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei…☆27Updated 2 years ago
- ☆63Updated 6 years ago
- This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using…☆53Updated 5 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 7 years ago
- Segmenting WSIs using Deep Convolutional Neural Networks☆19Updated 6 years ago
- ☆36Updated 2 years ago
- Demos for Cell Proposal Networks presented in ICIP 16 and DLMIA 16 (MICCAI-W)☆17Updated 8 years ago
- Dataset: landmarks for registration of histology images☆32Updated 4 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Updated 5 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆87Updated 2 years ago
- Instance segmentation via deep pixel embedding☆23Updated 4 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 4 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- ☆14Updated 6 years ago
- U-net based segmentation of nuclei in microscopy images☆53Updated 6 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- 2018 Data Science Bowl 2nd Place Solution☆104Updated 6 years ago
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆47Updated 3 years ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆78Updated last year
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆78Updated 2 years ago
- Deeply supervised density regression for automatic cell counting in microscopy images☆11Updated 3 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 4 months ago
- Retinal vessel analysis software for MATLAB☆23Updated 9 years ago
- MPM: Joint Representation of Motion and Position Map for Cell Tracking☆40Updated 3 years ago
- WSICS☆30Updated 6 years ago
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28Updated 6 years ago
- ☆120Updated 7 years ago
- Detect location and draw boundary of nuclei from microscopic images☆73Updated 4 years ago
- ☆25Updated 4 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago