Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image
☆11Jun 2, 2022Updated 3 years ago
Alternatives and similar repositories for cellprofiler-docker
Users that are interested in cellprofiler-docker are comparing it to the libraries listed below
Sorting:
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Jupyter notebooks for CellProfiler and friends☆14Mar 23, 2018Updated 7 years ago
- Various parts made for fluorescence microscopy + optics work☆16Jul 22, 2019Updated 6 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated this week
- Automatically exported from code.google.com/p/iocbio☆16Aug 5, 2015Updated 10 years ago
- Liquid handling robot for in situ serial multiplexing☆19Apr 7, 2017Updated 8 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Jan 17, 2022Updated 4 years ago
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated last year
- Customer Segmentation Anaylsis☆13May 31, 2019Updated 6 years ago
- Software package for holographic optical trapping (HOT) released under GPL and LGPL. Requires a CUDA compatible GPU and LabVIEW☆15Jul 2, 2022Updated 3 years ago
- QuickFigures is a toolset for creating scientific figures see publication for details☆37Feb 1, 2026Updated last month
- The Lean AI Stack provides a complete End to End solution for taking AI into production.☆10Sep 8, 2020Updated 5 years ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Nov 16, 2025Updated 3 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Lectures, labs and all documents associated with 3D Morphometrics workshop at FHL (Summer 2019)☆14Feb 6, 2020Updated 6 years ago
- Python port of the libqxt SpanSlider☆15Jul 25, 2017Updated 8 years ago
- AI-Application to identify blurry photos☆10Jul 20, 2020Updated 5 years ago
- Repository for vLume releases and changes☆10Oct 12, 2020Updated 5 years ago
- Deep learning extended depth-of-field microscope for fast and slide-free histology☆11Nov 22, 2021Updated 4 years ago
- ☆41Feb 13, 2026Updated 2 weeks ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated last year
- This is a repository for the Automated Microscopy Control Environment.☆10Jan 6, 2022Updated 4 years ago
- Direct volume rendering with WebGL 2.☆12Jan 18, 2024Updated 2 years ago
- Ghost repo for discussion aboput the LabPy projects.☆11Feb 8, 2015Updated 11 years ago
- A tutorial of classical shape analysis methods☆11Nov 25, 2023Updated 2 years ago
- Cookbook to set up secure jupyterhub using microk8s on your own hardware☆14Sep 30, 2021Updated 4 years ago
- ETL project to download and process both CME open interest data, COT data from the CFTC and NAV/shares-outstanding data from various ETF …☆12Jul 13, 2021Updated 4 years ago
- An R package to detect collective spatio-temporal phenomena☆13Sep 25, 2025Updated 5 months ago
- ☆46May 21, 2020Updated 5 years ago
- Python implementation of MATLAB's msalign function☆11Updated this week
- This is the repository for the openSIM project which integrates structured illumination microscopy into the UC2-system.☆12May 25, 2022Updated 3 years ago
- Collection of literature, math, etc. for Structured Illumination Microscopy☆10Apr 23, 2019Updated 6 years ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 27, 2025Updated 11 months ago
- ApE- A plasmid Editor☆13Jan 12, 2022Updated 4 years ago
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆12Apr 24, 2024Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- A toolbox to illustrate the use of CUDA together with Matlab.☆10Jan 5, 2017Updated 9 years ago