PreibischLab / multiview-simulation
Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise
☆12Updated 2 years ago
Alternatives and similar repositories for multiview-simulation
Users that are interested in multiview-simulation are comparing it to the libraries listed below
Sorting:
- ☆20Updated last month
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 4 years ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated 2 weeks ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated 2 weeks ago
- Core functionality of NanoJ☆16Updated last year
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆25Updated 2 weeks ago
- Lattice light-sheet post-processing utility.☆28Updated last week
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher☆23Updated 8 months ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 8 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- ImageJ convenience layer for N5☆17Updated this week
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 8 months ago
- ☆21Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 6 months ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆35Updated last year
- ☆22Updated 4 years ago
- python tools for BigDataViewer☆22Updated 4 months ago
- ☆12Updated 4 years ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Updated 11 months ago
- ☆18Updated last year
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 weeks ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 9 months ago