klasma / BaxterAlgorithmsLinks
Software for segmentation, tracking and analysis of cells in microscope image sequences.
☆40Updated last year
Alternatives and similar repositories for BaxterAlgorithms
Users that are interested in BaxterAlgorithms are comparing it to the libraries listed below
Sorting:
- Cell tracker designed for tracking intestinal organoids☆26Updated this week
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆31Updated 2 years ago
- official implementation of the PatchPerPix instance segmentation method☆33Updated 2 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆116Updated last year
- The U-Net Segmentation plugin for Fiji (ImageJ)☆88Updated 2 years ago
- ☆17Updated 7 years ago
- simple package for augmentation of n-dimensional arrays☆33Updated last year
- ☆21Updated 7 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Updated 4 years ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- ☆25Updated 4 years ago
- MPM: Joint Representation of Motion and Position Map for Cell Tracking☆40Updated 3 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- PyTorch implementation of SPOCO☆32Updated 11 months ago
- A python algorithm for tracking cells in 3D time lapse images.☆60Updated 3 months ago
- DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration☆46Updated 5 years ago
- U-net based segmentation of nuclei in microscopy images☆53Updated 6 years ago
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Updated 3 years ago
- Lineage Mapper Fiji plugin and MATLAB source code☆18Updated 2 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- ☆32Updated 2 years ago
- 🌈☆59Updated 3 months ago
- Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning☆195Updated 4 years ago
- The mutex watershed for image segmentation.☆67Updated 4 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago
- ☆21Updated 4 years ago
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆179Updated last month
- ☆194Updated 2 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 5 years ago
- Dense Steerable Filter CNN☆76Updated 2 years ago