Alternatives and similar repositories for BaxterAlgorithms

Users that are interested in BaxterAlgorithms are comparing it to the libraries listed below

• juglab / EmbedSeg
  Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
  ☆118Updated last year
• Kainmueller-Lab / PatchPerPix
  official implementation of the PatchPerPix instance segmentation method
  ☆34Updated 2 years ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆31Updated 2 years ago
• naivete5656 / WSCTBFP
  Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020
  ☆11Updated 5 years ago
• jvzonlab / OrganoidTracker
  Cell tracker designed for tracking intestinal organoids
  ☆26Updated last week
• lmb-freiburg / Unet-Segmentation
  The U-Net Segmentation plugin for Fiji (ImageJ)
  ☆88Updated 2 years ago
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆33Updated 2 years ago
• divelab / deepem3d
  ☆17Updated 7 years ago
• alexklibisz / deep-calcium
  Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)
  ☆29Updated 2 years ago
• soltanianzadeh / STNeuroNet
  Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…
  ☆67Updated 5 years ago
• CellTrackingChallenge / CTC-FijiPlugins
  [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.
  ☆10Updated 3 years ago
• trasse / OpSeF-IV
  ☆25Updated 5 years ago
• carpenterlab / unet4nuclei
  U-net based segmentation of nuclei in microscopy images
  ☆52Updated 6 years ago
• sciai-lab / mutex-watershed
  The mutex watershed for image segmentation.
  ☆67Updated 4 years ago
• AllenCell / aics-ml-segmentation
  ☆32Updated 3 weeks ago
• CRBS / cdeep3m
  Please go to https://github.com/CRBS/cdeep3m2 for most recent version
  ☆59Updated 5 years ago
• funkelab / lsd
  🌈
  ☆60Updated 4 months ago
• brikeats / Cell-Tracking
  Python scripts for tracking cells in fluorescent microscopy.
  ☆11Updated 7 years ago
• kreshuklab / spoco
  PyTorch implementation of SPOCO
  ☆32Updated last year
• usnistgov / Lineage-Mapper
  Lineage Mapper Fiji plugin and MATLAB source code
  ☆18Updated 3 years ago
• sartorius-research / LIVECell
  ☆197Updated 2 years ago
• zudi-lin / pytorch_connectomics
  PyTorch Connectomics: segmentation toolbox for EM connectomics
  ☆179Updated 2 months ago
• oist / Usiigaci
  Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning
  ☆197Updated 4 years ago
• funkelab / linajea
  ☆18Updated 2 years ago
• urakubo / UNI-EM
  A unified environment for DNN-based automated segmentation of neuronal EM images
  ☆37Updated last year
• WenChentao / 3DeeCellTracker
  A python algorithm for tracking cells in 3D time lapse images.
  ☆61Updated this week
• AllenInstitute / aics-segmentation
  AICS Segmentation (One-Way) Mirror
  ☆45Updated 4 years ago
• AllenCellModeling / pytorch_fnet
  Three dimensional cross-modal image inference
  ☆158Updated 4 years ago
• JunyaHayashida / MPM
  MPM: Joint Representation of Motion and Position Map for Cell Tracking
  ☆41Updated 4 years ago
• cremi / cremi_python
  Python scripts to read and write the CREMI hdf5 file format.
  ☆38Updated 2 years ago