R package for RNA-seq workflows at HCI
☆15Nov 20, 2025Updated 4 months ago
Alternatives and similar repositories for hciR
Users that are interested in hciR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- An iobio app for examining gene variants☆20Sep 10, 2018Updated 7 years ago
- A fork of the project Excavator2 from sourceforge.☆10Jun 29, 2017Updated 8 years ago
- Generate an enhanced VCF files from ClinVar XML Full releases☆15Feb 23, 2026Updated last month
- ☆10Apr 19, 2020Updated 5 years ago
- 180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering,…☆18Feb 19, 2026Updated last month
- UCSC liftOver (genome build converter) for vcf format☆12Nov 29, 2017Updated 8 years ago
- A wicked fast 2048 game engine with AI☆15Mar 12, 2014Updated 12 years ago
- Core utilities for single-cell RNA-seq☆12Apr 13, 2025Updated 11 months ago
- rawr package☆17Mar 17, 2026Updated last week
- Minimal and flexible 'ggplot2' themes using 'Lato' Typeface☆15Nov 18, 2017Updated 8 years ago
- R package for cleaning anthropometric (height and weight) data from electronic health record systems.☆18Mar 13, 2026Updated last week
- Test Expectations of a Data Frame☆14Oct 21, 2019Updated 6 years ago
- ☆16Mar 6, 2024Updated 2 years ago
- ☆15Feb 7, 2020Updated 6 years ago
- R Interface to Europe PMC RESTful Web Service☆28Jul 1, 2024Updated last year
- BioData Club website and project management☆10Jul 28, 2021Updated 4 years ago
- Lightweight validation tool for checking function arguments and data analysis scripts.☆12Dec 24, 2024Updated last year
- My CV built using R Markdown and the vitae package.☆36Oct 9, 2025Updated 5 months ago
- ☆16Sep 11, 2018Updated 7 years ago
- Talk at scipy 2018: Interactive 3d Visualization in Jupyter☆14Jul 14, 2018Updated 7 years ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 7 years ago
- ☆12May 4, 2022Updated 3 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Mar 10, 2018Updated 8 years ago
- RUFUS k-mer based genomic variant detection☆54Jan 5, 2026Updated 2 months ago
- Contains the programming exercises and assignments for Deep Learning A-Z course on Udemy. Includes Artificial Neural Network, Convolutio…☆16Sep 2, 2017Updated 8 years ago
- A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg☆11Mar 27, 2019Updated 6 years ago
- An automated model test system for synthetic biology models of gene expression and regulation.☆15Sep 17, 2020Updated 5 years ago
- Leaflet plugin for easy adding of tiles from Kartverket☆31Jan 9, 2020Updated 6 years ago
- [R package]: Datasets from "Applied Logistic Regression" by Hosmer D.W., Lemeshow S. and Sturdivant X.☆12Nov 3, 2025Updated 4 months ago
- Corresponding code of 'Quiros, A. C., Coudray, N., Yeaton, A., Sunhem, W., Murray-Smith, R., Tsirigos, A., Yuan, K. Adversarial learning …☆15Jul 22, 2022Updated 3 years ago
- Notes on analysing RNAseq, focusing on alternative splicing & polyadenylation.☆12Nov 23, 2021Updated 4 years ago
- Deep Learning Nanodegree by Udacity.☆18Jul 14, 2018Updated 7 years ago
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆14Aug 6, 2022Updated 3 years ago
- Lasagna plots in base and ggplot graphics in R☆17Feb 3, 2016Updated 10 years ago
- Parse full text XML documents from Pubmed Central☆36Dec 9, 2019Updated 6 years ago
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Aug 18, 2020Updated 5 years ago
- ClusterScan, search for clusters of features in a given annotation.☆11Aug 26, 2021Updated 4 years ago