Fast big data XML parser and library, written in Ruby
☆18Sep 16, 2015Updated 11 years ago
Alternatives and similar repositories for blastxmlparser
Users that are interested in blastxmlparser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Big data bioinformatics repository☆11May 21, 2014Updated 12 years ago
- Ruby Queue☆13Sep 30, 2015Updated 11 years ago
- MAF parser for BioRuby☆11Jan 26, 2016Updated 10 years ago
- Tools for keeping track of biogems. Moved to https://git.thebird.nl/free/biogems.info☆13Nov 23, 2019Updated 6 years ago
- A faster lmm for GWAS. Supports GPU backend.☆15Dec 5, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Swiss knife of tabular data☆12Mar 13, 2020Updated 6 years ago
- BaseSpace Ruby SDK provides an easy-to-use Ruby environment that enables developers to authenticate users, retrieve data, and upload data…☆12Nov 26, 2013Updated 12 years ago
- TODO: one-line summary of your gem☆10Oct 10, 2017Updated 9 years ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 11 years ago
- This plugins is intended to wrap the common software used for Next Generation Sequencing data☆28Jan 18, 2023Updated 3 years ago
- ruby queue is a zero-admin zero-configuration tool used to create instant unix clusters☆21Mar 23, 2013Updated 13 years ago
- This project is no longer maintained.☆13Oct 11, 2012Updated 14 years ago
- BioGem helps Bioinformaticians start developing plugins/modules for BioRuby creating a scaffold and a gem package☆15May 20, 2014Updated 12 years ago
- Statistical mixed effects models in Ruby☆21Jul 8, 2016Updated 10 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A plotting library in Ruby built on top of Vega and D3.☆41Jun 22, 2025Updated last year
- Streamable FASTA parser.☆14May 18, 2026Updated 5 months ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- Syllabus and materials for bioinformatics lecture + lab☆21Apr 23, 2015Updated 11 years ago
- Genome Annotation for the Masses☆36Jul 9, 2017Updated 9 years ago
- An ultra light YAML-based pipeline execution engine☆20Aug 30, 2017Updated 9 years ago
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Sep 24, 2013Updated 13 years ago
- A tiny package manager for crucial unix and bioinformatics tools☆27Apr 30, 2015Updated 11 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- User-friendly tool to quickly go from 16S rRNA sequence data to an OTU matrix☆10Apr 16, 2014Updated 12 years ago
- An experiment in trying to define a core and cleaned-up NumPy API: RNumPy☆13Feb 19, 2021Updated 5 years ago
- Basic tools written in the D programming language, to learn the language and test out idea's☆12Mar 28, 2016Updated 10 years ago
- BioLib brings together a set of opensource libraries written in C/C++ and makes them available for all Bio* languages☆38Oct 5, 2010Updated 16 years ago
- A pathway profiling tool designed for traversing metabolic pathway graphs, identifying most complete paths based on an evaluation set of …☆11Sep 10, 2026Updated last month
- OWLIM client library for Ruby☆13Jun 5, 2013Updated 13 years ago
- Octopress source for sciruby.com☆13Feb 29, 2024Updated 2 years ago
- Breakpointer is a fast algorithm to locate breakpoints of structural variants from single-end reads produced by next-generation sequencin…☆10May 2, 2014Updated 12 years ago
- Feature Annotation Location Description Ontology☆34Jan 21, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A new algorithm for scaffolding☆10Sep 18, 2018Updated 8 years ago
- Case-control matching for microbiome data☆10Aug 8, 2023Updated 3 years ago
- RDF summit for life science☆11Jul 1, 2026Updated 3 months ago
- ☆11Dec 3, 2013Updated 12 years ago
- Github Action to deploy conda package to Anaconda repository☆11May 28, 2021Updated 5 years ago
- Mathematica Language Library in Ruby☆12Jan 15, 2017Updated 9 years ago
- Gene Family Annotation Workflow☆12Mar 26, 2024Updated 2 years ago