GenomicsStandardsConsortium / mixs
Minimum Information about any (X) Sequence” (MIxS) specification
☆42Updated 2 weeks ago
Alternatives and similar repositories for mixs:
Users that are interested in mixs are comparing it to the libraries listed below
- This repository contains the editors's working copy of OMP and public release files.☆8Updated 11 months ago
- The Genomic Epidemiology Application Ontology describes the genomics, laboratory, clinical and epidemiological contextual information req…☆20Updated 3 weeks ago
- Managing metadata and policy around metadata in NMDC☆2Updated 11 months ago
- Sample search by metadata and features☆47Updated last year
- OHMI: The Ontology of Host-Microbiome Interactions☆12Updated 2 years ago
- Bioinformatics Pipeline and Visualization resources☆55Updated 6 months ago
- ☆14Updated 6 years ago
- Protein Alignment and Detection Interface☆61Updated 11 months ago
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆18Updated 3 months ago
- NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.☆30Updated 4 months ago
- A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.☆28Updated last month
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆35Updated 2 years ago
- Repository for all Ocean Sampling Day related source code with information on how-to acquire OSD data☆13Updated 10 months ago
- PaperBLAST: find papers about a protein or its homologs☆39Updated 2 months ago
- Get, parse, and extract information from the SRA metadata files☆38Updated 2 years ago
- Webin command line submission program.☆34Updated last week
- R package for searching, downloading and analysis of EBI MGnify metagenomics data☆21Updated 3 months ago
- Flavonoids are specialized metabolites in plants that have numerous functions including protection against abiotic stresses, pigmentation…☆16Updated last week
- ENA upload tool - script your Open Data upload to the European Nucleotide Archive☆28Updated last month
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆46Updated last month
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆12Updated last month
- Scripts and libraries for Environmental Genomics☆37Updated last month
- Phylogenetic tree viewer based on D3.js☆56Updated 7 months ago
- MARS: improving Multiple circular sequence Alignment using Refined Sequences☆29Updated 4 months ago
- A package to annotate protein sequences☆55Updated last month
- ☆35Updated last year
- Tutorial on using E-utilities☆22Updated this week
- MFannot is a program for the annotation of mitochondrial and plastid genomes☆19Updated last year
- GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click…☆81Updated 3 months ago
- PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes☆27Updated 8 months ago