Alternatives and similar repositories for depict

Users that are interested in depict are comparing it to the libraries listed below

• xqwen / dap
  software package for integrative genetic association analysis
  ☆35Updated 2 years ago
• cumc / bioworkflows
  In-house computational biology workflows at Columbia Neurology
  ☆35Updated last year
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆46Updated last year
• thewonlab / H-MAGMA
  ☆34Updated 2 years ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆48Updated 2 months ago
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆31Updated 2 years ago
• Nealelab / UKBB_ldsc_scripts
  Scripts used for generating Neale Lab UKB results
  ☆20Updated 2 years ago
• yanglab-emory / TIGAR
  ☆21Updated 4 months ago
• MRCIEU / gwasvcf
  Reading, querying and writing GWAS summary data in VCF format
  ☆84Updated 2 months ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆52Updated last month
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆18Updated 9 years ago
• hakyim / TO-DELETE-PrediXcan
  Code for the in-dev PrediXcan Project
  ☆27Updated 2 years ago
• qlu-lab / PUMAS
  Fine-tuning polygenic risk score models using GWAS summary statistics
  ☆52Updated 5 months ago
• CBIIT / LDlinkR
  LDlinkR
  ☆59Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆33Updated 4 years ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆41Updated 5 months ago
• lagelab / quack
  Machine learning algorithm to predict biological pathway relationships based on functional genomics networks
  ☆20Updated 6 years ago
• mikegloudemans / gwas-download
  Easily download publicly available GWAS summary statistics.
  ☆76Updated last year
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated last year
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• Kyoko-wtnb / FUMA-webapp
  Source code of FUMA GWAS web application
  ☆57Updated last year
• meyer-lab-cshl / plinkQC
  R package for quality control of plink genetic datasets
  ☆59Updated last month
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated 3 months ago
• gabraham / plink2R
  Read PLINK BED/BIM/FAM files into R
  ☆41Updated 4 years ago
• clagiamba / moloc
  ☆36Updated 4 years ago
• RajLabMSSM / echolocatoR
  Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
  ☆38Updated 2 years ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago
• FinucaneLab / pops
  ☆82Updated 3 weeks ago