Rocking R at UMCCR
☆10Oct 11, 2020Updated 5 years ago
Alternatives and similar repositories for rock
Users that are interested in rock are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- R package for applying Gamma-Poisson regression to identify statistical enrichment or depletion of somatic mutations in regions after cor…☆32Oct 29, 2025Updated 9 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Sep 3, 2021Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆18Aug 14, 2024Updated last year
- R Deep Learning Projects, published by Packt☆22Jan 30, 2023Updated 3 years ago
- ISMB 2020: Improved survival analysis by learning shared genomic information from pan-cancer data☆17Jul 13, 2020Updated 6 years ago
- broom helpers for decision tree methods (rpart, randomForest, and more!)☆29Apr 30, 2025Updated last year
- R Deep Learning Cookbook, published by Packt☆31Apr 22, 2026Updated 3 months ago
- An R package to time somatic mutations☆73Dec 12, 2020Updated 5 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆21Apr 20, 2025Updated last year
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆22May 11, 2018Updated 8 years ago
- R Bindings for htslib/bcf☆10Oct 4, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 🍱 R implementation for selected machine learning methods with deep learning frameworks (Keras, Tensorflow)☆46Mar 18, 2019Updated 7 years ago
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated 2 years ago
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆38Sep 16, 2025Updated 10 months ago
- ☆14Mar 20, 2021Updated 5 years ago
- do some exercise☆15Dec 2, 2025Updated 7 months ago
- 🤠 📿 The Highly Adaptive Lasso☆49Nov 19, 2024Updated last year
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Aug 24, 2022Updated 3 years ago
- The CICA/IoA HPC cluster☆15Jun 5, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Jan 21, 2023Updated 3 years ago
- Implementations of survival models in R☆59Jul 1, 2024Updated 2 years ago
- horizontal pileup☆16Nov 11, 2022Updated 3 years ago
- ☆11Jul 31, 2019Updated 6 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46May 1, 2026Updated 2 months ago
- Using Pubmed data and tf.keras to predict if an ophthalmology paper will make it into a top 15 journal☆10May 4, 2020Updated 6 years ago
- A library of "Micro Agents" that make it easy to add reliable intelligence to any application.☆13Sep 21, 2024Updated last year
- cDriver R package for finding candidate driver genes in cancers☆18Jan 18, 2018Updated 8 years ago
- A Chrome extension for edX and XueTangX to download subtitle file from its page☆13Jan 2, 2015Updated 11 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Build SVG Custom User Interface in R, rmd, qmd and Shiny☆20Apr 10, 2025Updated last year
- Fork of https://code.google.com/p/ngs-analysis☆17Sep 14, 2013Updated 12 years ago
- Feature Selection in R using glmnet-lasso, xgboost and ranger☆55Aug 9, 2024Updated last year
- A framework to infer mutational signatures in cancer over time☆58Jul 9, 2019Updated 7 years ago
- ☆15Jun 3, 2022Updated 4 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆15Jul 12, 2026Updated 2 weeks ago
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago