mcapuccini / TheSparkBox
TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.
☆12Updated 6 years ago
Alternatives and similar repositories for TheSparkBox:
Users that are interested in TheSparkBox are comparing it to the libraries listed below
- MaRe leverages the power of Docker and Spark to run and scale your serial tools in MapReduce fashion.☆14Updated 2 years ago
- ☆14Updated 2 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 8 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- A fast, parallel, streaming multipart uploader for S3☆13Updated 7 years ago
- Heterogeneity-incorporating Workflow ApplicationMaster for YARN☆26Updated 7 years ago
- Benchmarking toolkit for variant calling☆47Updated 4 years ago
- ☆12Updated 7 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆31Updated 9 months ago
- Data and workflow examples☆16Updated 6 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 3 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 7 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated 10 months ago
- [Bio in Docker] Symposium 2015☆21Updated 7 years ago
- Bioinformatics Open Source Sequence machine☆33Updated last year
- Basic, no assumptions, multi-pileup☆24Updated 10 years ago
- ☆11Updated 8 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Updated 10 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆39Updated 2 months ago
- Next generation sequencing (NGS/HTS) tools.☆18Updated 11 months ago
- WebApp for DNA variants interpretation☆13Updated last week
- High throughput, pain-free big data pipelines.☆30Updated 7 years ago
- Spark VCF data source implementation for Dataframes☆14Updated 2 years ago