mskwark / PconsC3
Faster, more accurate and entirely open source method for predicting contacts in proteins
☆12Updated 6 years ago
Alternatives and similar repositories for PconsC3:
Users that are interested in PconsC3 are comparing it to the libraries listed below
- Pseudo Likelihood Maximization for protein in Julia☆50Updated 3 weeks ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆20Updated 5 years ago
- Contact map alignment☆41Updated 3 years ago
- A Deep Learning based protein flexibility prediction tool.☆8Updated 2 years ago
- Fast and accurate protein structure prediction☆49Updated 2 weeks ago
- ☆29Updated 4 years ago
- Improved ab initio protein structure reconstruction☆15Updated 6 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆34Updated 3 years ago
- ☆20Updated 3 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆34Updated 4 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 6 years ago
- Contact map alignment☆16Updated 6 years ago
- ☆35Updated 5 years ago
- Contact Prediction ToolKit☆22Updated 2 years ago
- Deep convolutional networks for fold recognition☆22Updated 5 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆22Updated 3 years ago
- ☆16Updated last month
- A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites☆29Updated 6 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆22Updated 5 months ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆53Updated 2 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Updated 3 years ago
- DeepContact Software☆26Updated 6 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆55Updated 3 years ago
- ☆30Updated 4 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆30Updated last week
- Autoregressive networks for protein☆36Updated 3 weeks ago
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆22Updated 3 years ago
- ☆28Updated 9 months ago
- Contact-based protein structure prediction☆10Updated 5 years ago