ulo / ProtterLinks
a customizable protein feature visualization tool
☆16Updated 2 years ago
Alternatives and similar repositories for Protter
Users that are interested in Protter are comparing it to the libraries listed below
Sorting:
- R package for functionally scoring phosphorylation sites☆21Updated 5 years ago
- ☆65Updated last year
- A Python interface to proteomics data repositories☆35Updated 4 months ago
- Python client for PRIDE Archive Rest API.☆24Updated this week
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆90Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆59Updated last week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- ☆35Updated 2 months ago
- Picotti lab data analysis package.☆64Updated 6 months ago
- ☆55Updated 4 years ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated 2 months ago
- Vector graphics cartoons from protein structure☆53Updated 3 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆43Updated 2 months ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last month
- Shiny app to easily create publishable plots for scientific papers☆39Updated 2 months ago
- pathway and network analysis for metabolomics☆42Updated last year
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated 2 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆86Updated last month
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Updated 2 years ago
- Analysis of co-fractionation MS datasets☆13Updated 3 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Python package for investigating the structural context of PTMs☆28Updated 9 months ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆27Updated 10 months ago
- Report processing and protein quantification for MS-based proteomics☆48Updated 2 years ago
- An RNA manipulation library.☆56Updated last year
- ☆28Updated 8 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 7 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated this week