Alternatives and similar repositories for Protter

Users that are interested in Protter are comparing it to the libraries listed below

• evocellnet / funscoR
  R package for functionally scoring phosphorylation sites
  ☆21Updated 6 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆67Updated last year
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆94Updated last year
• HaoGroup-ProtContLib / Protein-Contaminant-Libraries-for-DDA-and-DIA-Proteomics
  This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…
  ☆31Updated last year
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 11 months ago
• PRIDE-Archive / pridepy
  Python client for PRIDE Archive Rest API.
  ☆26Updated this week
• jordisr / cellscape
  Vector graphics cartoons from protein structure
  ☆56Updated 3 years ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆53Updated 2 months ago
• PayneLab / ProteomicsEducation
  ☆36Updated 4 months ago
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆25Updated 2 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆36Updated 5 months ago
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆64Updated this week
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆77Updated 2 weeks ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• wenbostar / PDV
  PDV: an integrative proteomics data viewer
  ☆58Updated 5 months ago
• Proteomicslab57357 / UniprotR
  Retrieving Information of Proteins from Uniprot
  ☆72Updated last year
• CompOmics / moFF
  A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
  ☆33Updated 4 years ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆64Updated 8 months ago
• MannLabs / alphamap
  An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
  ☆89Updated 3 weeks ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆49Updated 9 months ago
• broadinstitute / g2papi
  Python Client Library for the G2P Portal API
  ☆15Updated 4 months ago
• Lattice-Automation / primers
  A PCR primer tool for DNA assembly flows
  ☆34Updated last year
• kalekundert / wellmap
  File format for 96-well plate layouts.
  ☆23Updated 2 years ago
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆98Updated 2 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆44Updated this week
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆43Updated last month
• teese / eccpy
  ECCpy is a program for EC50 calculation in python.
  ☆44Updated 2 years ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆55Updated 9 months ago
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆81Updated last month
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆53Updated last week