nodrogluap / OpenDBALinks
GPU-accelerated Dynamic Time Warp (DTW) Barycenter Averaging
☆68Updated 3 months ago
Alternatives and similar repositories for OpenDBA
Users that are interested in OpenDBA are comparing it to the libraries listed below
Sorting:
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆17Updated 5 years ago
- Fast hierarchical clustering routines for R and Python.☆153Updated 2 weeks ago
- fast, pure-python interval overlap testing☆52Updated 5 years ago
- Fast Bayesian Hidden Markov Model with Wavelet Compression☆17Updated 5 years ago
- A repository for the GenGraph toolkit for the creation and manipulation of graph genomes☆51Updated 4 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 7 months ago
- Sequence data label generation and ingestion into deep learning models☆11Updated 3 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆40Updated 4 years ago
- MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data☆18Updated 2 years ago
- Efficient handling of FASTQ files from Python☆51Updated 3 months ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- A python library for efficient KNN search within metric spaces using multiple distance functions.☆14Updated last year
- A python library for generating a clustered heatmap with dendrograms.