ngless-toolkit / ngless
NGLess: NGS with less work
☆142Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for ngless
- RNAlien - unsupervised RNA family model construction☆14Updated 3 years ago
- Fast and accurate genomic distances using HyperLogLog☆160Updated last year
- A collection of bioinformatics algorithms☆12Updated 2 years ago
- Qiita - A multi-omics databasing effort☆120Updated last month
- MinHash Alignment Process (MHAP, pronounced MAP): locality-sensitive hashing to detect long-read overlaps and utilities☆96Updated 2 years ago
- Bayesian co-estimation of phylogenies and multiple alignments via MCMC☆46Updated this week
- Bioinformatics pipelines with Haskell and Shake☆55Updated 5 years ago
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data☆92Updated 2 weeks ago
- Inference of ploidy and heterozygosity structure using whole genome sequencing data☆241Updated 2 weeks ago
- Novelty-inclusive microbial community profiling of shotgun metagenomes☆137Updated last week
- Program for analysing NGS data.☆231Updated last week
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆216Updated last month
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆224Updated 10 months ago
- Fast genome analysis from unassembled short reads☆260Updated 7 months ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆215Updated last year
- RNA modifications detection from Nanopore dRNA-Seq data☆80Updated 10 months ago
- SEER, reimplemented in python 🐍🔮☆111Updated 3 weeks ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆236Updated 5 months ago
- A metagenomic and isolate assembly and analysis pipeline built with AMOS☆93Updated 7 years ago
- ☆116Updated this week
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆148Updated 11 months ago
- a toolkit for working with Oxford nanopore data☆243Updated last year
- Alignment of RNAs☆24Updated 3 months ago
- Programs to analyse NGS data for population genetics purposes☆170Updated 2 months ago
- Python graph database framework for bioinformatics☆92Updated 2 years ago
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆241Updated 4 years ago
- VGP repository for the genome assembly working group☆188Updated last year
- A robust, extensible metagenomics pipeline☆167Updated 3 months ago