kaizhang / bioinformatics-toolkit
A collection of bioinformatics algorithms
☆12Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for bioinformatics-toolkit
- Bioinformatics pipelines with Haskell and Shake☆55Updated 5 years ago
- RNAlien - unsupervised RNA family model construction☆14Updated 3 years ago
- Bayesian co-estimation of phylogenies and multiple alignments via MCMC☆46Updated this week
- All-in-one analysis pipeline☆34Updated 2 months ago
- Octree is a shallow tree structure for 3-dimensional points☆20Updated 4 years ago
- PDB parser in Haskell☆21Updated last year
- Functional highly reproducible bioinformatics pipelines☆78Updated last week
- Scientific workflow management☆51Updated 2 years ago
- NGLess: NGS with less work☆142Updated 3 months ago
- Wiki form of BLAST documentation from NCBI☆16Updated 7 years ago
- Temporal Pathway Synthesizer☆16Updated 4 months ago
- Model of baysig language in Haskell (minus estimate)☆15Updated 8 years ago
- Explore and analyze biological sequence data☆16Updated 3 months ago
- Streaming csv parser using cassava and pipes☆20Updated 8 years ago
- fast, reliable and handy demultiplexing tool for fastx files☆14Updated 7 months ago
- Fast Neighbor-Joining and other distance-based methods for phylogenetics☆10Updated 5 months ago
- a cythonized, extended version of the interval search tree in bx☆30Updated 5 years ago
- Altered TCR Ligand Affinities and Structures☆10Updated 11 months ago
- ☆41Updated last week
- Haskell FFI bindings to CUDA☆75Updated last year
- QTL analysis software for high-dimensional data and complex cross designs☆10Updated 2 months ago
- Lenses and Traversals for Aeson, based on Microlens.☆14Updated 5 months ago
- Efficient, high-level dynamic programming☆26Updated last year
- Time-varying values with start and end times.☆16Updated 5 months ago
- a simple lightweight workflow engine for data analysis scripting☆11Updated 5 years ago
- Haskell port of the Tensor Algebra COmpiler☆16Updated 5 years ago
- Painless general-purpose sampling.☆23Updated last week
- Extended Kalman filtering in Haskell☆23Updated 6 years ago
- Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletion…☆25Updated 6 years ago