Alternatives and similar repositories for bioinformatics-workbook

Users that are interested in bioinformatics-workbook are comparing it to the libraries listed below

• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆155Updated 2 years ago
• nextflow-io / training
  Nextflow training material
  ☆209Updated this week
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆386Updated 6 months ago
• melbournebioinformatics / melbournebioinformatics.github.io
  Melbourne Bioinformatics documentation in markdown format
  ☆120Updated this week
• Shivi91 / Rosalind-1
  Solutions to Rosalind Bioinformatics Problems
  ☆75Updated 12 years ago
• linsalrob / ComputationalGenomicsManual
  Robs manual for the computational genomics and bioinformatics class.
  ☆265Updated last year
• gpertea / gffread
  GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
  ☆450Updated last year
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆201Updated 5 years ago
• digo4 / Clinical-Genomics
  Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
  ☆43Updated 2 years ago
• BioinformaNicks / Bioinformatics-training-collection
  A collection of resources for learning about tools and programming languages related to Bioinformatics
  ☆189Updated 3 years ago
• Magdoll / cDNA_Cupcake
  Miscellaneous collection of Python and R scripts for processing Iso-Seq data
  ☆279Updated 2 years ago
• NBISweden / GAAS
  Genome Assembly and Annotation Service code
  ☆217Updated 2 years ago
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆65Updated last week
• najoshi / sickle
  Windowed Adaptive Trimming for fastq files using quality
  ☆226Updated 8 years ago
• usadellab / Trimmomatic
  ☆284Updated 3 months ago
• maxplanck-ie / snakepipes
  Customizable workflows based on snakemake and python for the analysis of NGS data
  ☆396Updated this week
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆115Updated last month
• rpetit3 / fastq-dl
  Download FASTQ files from SRA or ENA repositories.
  ☆363Updated last week
• BioInfoTools / BBMap
  (Not Offical) BBMap short read aligner, and other bioinformatic tools.
  ☆244Updated 4 years ago
• sortmerna / sortmerna
  SortMeRNA: next-generation sequence filtering and alignment tool
  ☆282Updated 4 months ago
• metagenome-atlas / atlas
  ATLAS - Three commands to start analyzing your metagenome data
  ☆400Updated last month
• igordot / genomics
  A collection of scripts and notes related to genomics and bioinformatics
  ☆217Updated last month
• timflutre / trimmomatic
  Read trimming tool for Illumina NGS data.
  ☆149Updated 10 years ago
• TransDecoder / TransDecoder
  TransDecoder source
  ☆301Updated 3 months ago
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆158Updated last month
• CompEpigen / figeno
  Tool for plotting sequencing data along genomic coordinates.
  ☆335Updated last month
• evanpeikon / bash_fundamentals
  Introduction to Bash for bioinformatics
  ☆50Updated last year
• primer3-org / primer3
  Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
  ☆272Updated 8 months ago
• franciscozorrilla / metaGEM
  An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within micro…
  ☆253Updated last year
• SvetlanaUP / A-microbiologist-wants-to-compute
  This repo collects the list of learning online resources related to microbiome computational science and tools.
  ☆103Updated last year