natacourby / Disease_ontologies_for_knowledge_graphsLinks
Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-references to allow easy switch between ontology hierarchies for data integration purpose.
☆21Updated 4 years ago
Alternatives and similar repositories for Disease_ontologies_for_knowledge_graphs
Users that are interested in Disease_ontologies_for_knowledge_graphs are comparing it to the libraries listed below
Sorting:
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 2 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆56Updated last week
- Template for creating a BioCypher-driven knowledge graph☆12Updated last month
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆70Updated last week
- Build PharMeBINet from different sources.☆18Updated this week
- Github repo for the Experimental Factor Ontology (EFO)☆58Updated this week
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Updated 7 years ago
- Biomedical Term Annotator☆9Updated 4 months ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- Method for drug repurposing from knowledge graphs and literature☆35Updated 4 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆192Updated last year
- ☆24Updated 4 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- TypeDB Bio: Biomedical Knowledge Graph☆85Updated last month
- ☆56Updated 4 years ago
- A stitching platform for InXight☆15Updated 3 months ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 2 months ago
- 🪝 What's the latest version for each database?☆27Updated this week
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 9 years ago
- Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compo…☆47Updated 3 years ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆41Updated last year
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆36Updated this week
- PyBioPAX: A python implementation of the BioPAX object model☆24Updated last year
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆11Updated last year
- This repository contains training material for querying SIB (Swiss Institute of Bioinformatics) resources with SPARQL.☆11Updated 8 months ago
- A Knowledge Graph for Relational Learning On Biological Data☆101Updated last year
- ☆23Updated 8 months ago
- 🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)☆137Updated last year
- Don't worry about DrugBank licensing - write code that knows how to download it automatically☆48Updated 5 months ago