fair-workflows / openpredictLinks
☆16Updated last year
Alternatives and similar repositories for openpredict
Users that are interested in openpredict are comparing it to the libraries listed below
Sorting:
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Updated last week
- A Standard Database for Drug Repositioning☆19Updated 8 years ago
- Code to build the Target Central Resource Database (TCRD).☆11Updated 4 years ago
- 🪝 What's the latest version for each database?☆28Updated this week
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- ☆58Updated 5 years ago
- ☆130Updated 2 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆197Updated last year
- A Knowledge Graph for Relational Learning On Biological Data☆107Updated last year
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆12Updated last year
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆74Updated this week
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆67Updated 2 months ago
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆33Updated 2 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆18Updated this week
- NP-KG: Knowledge Graph Framework for Natural Product-Drug Interactions☆18Updated last year
- The Clinical Trials Knowledge Graph☆65Updated 2 years ago
- Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets☆135Updated 4 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆55Updated this week
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 5 years ago
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆21Updated 4 years ago
- ☆24Updated 5 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated last week
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆57Updated 3 weeks ago
- mOWL: Machine Learning library with Ontologies☆81Updated this week
- Grounding of biomedical named entities with contextual disambiguation☆46Updated last week
- Ontology cross-reference and mapping service☆20Updated last month
- Build PharMeBINet from different sources.☆20Updated last month
- Adverse Outcome Pathway Ontology☆13Updated last year
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆27Updated 4 months ago