Alternatives and similar repositories for biochem4j:

Users that are interested in biochem4j are comparing it to the libraries listed below

• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆20Updated 5 months ago
• NeilPearson-Lilly / TractaViewer
  ☆11Updated 4 years ago
• Murali-group / PathLinker
  Connect the dots in networks.
  ☆18Updated 4 years ago
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆31Updated 10 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆49Updated 5 months ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• elixir-europe / biohackathon-projects-2023
  Project code for BioHackathon Europe 2023.
  ☆17Updated 4 months ago
• krassowski / multi-omics-state-of-the-field
  Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
  ☆25Updated last year
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆28Updated 11 months ago
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆34Updated 3 months ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated last year
• adam-sam-brown / repoDB
  A Standard Database for Drug Repositioning
  ☆18Updated 7 years ago
• SBRG / Recon3D
  A 3-Dimensional View of Human Metabolism and Disease
  ☆26Updated 6 years ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆33Updated this week
• amberbiology / py4lifesci
  Code repository for the book "Python for the Life Sciences" by Lancaster & Webster
  ☆28Updated 4 years ago
• tatonetti-lab / onsides
  A resource of adverse drug effects extracted from FDA structured product labels
  ☆64Updated last month
• mfitzp / padua
  Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)
  ☆23Updated last year
• larsjuhljensen / tagger
  ☆22Updated last year
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆25Updated 7 years ago
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆34Updated last week
• tyo-nu / MINE-Database
  Metabolic In silico Network Expansion (MINE) Database Construction and DB Logic
  ☆19Updated 11 months ago
• workflow4metabolomics / tools-metabolomics
  Galaxy tools for metabolomics maintained by Workflow4Metabolomics
  ☆25Updated last month
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆28Updated this week
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 3 years ago
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆57Updated last year
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 2 years ago
• DrugTargetOntology / DTO
  DTO ontology files
  ☆8Updated 6 years ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 6 months ago
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆45Updated 2 years ago