Alternatives and similar repositories for nuclick_torch

Users that are interested in nuclick_torch are comparing it to the libraries listed below

• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆93Updated 2 weeks ago
• TissueImageAnalytics / cerberus
  One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
  ☆93Updated 9 months ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆173Updated 2 months ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆105Updated 9 months ago
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆55Updated 8 months ago
• ozanciga / self-supervised-histopathology
  Pretrained model for self supervised histopathology
  ☆120Updated 3 years ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆61Updated 5 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆68Updated 2 years ago
• mostafajahanifar / awesome-dg-cpath
  Awesome Domain Generalization for Computational Pathology
  ☆18Updated 9 months ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆36Updated 6 months ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆81Updated last year
• impromptuRong / hd_wsi
  ☆35Updated 5 months ago
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆32Updated last year
• wanghao14 / Stain_Normalization
  Some stain normalization code
  ☆90Updated 2 years ago
• jnkather / DeepHistology
  A pan-cancer platform for mutation prediction from routine histology
  ☆69Updated 4 years ago
• AIRMEC / im4MEC
  Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…
  ☆49Updated last year
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆151Updated 7 months ago
• masih4 / NuInsSeg
  NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images
  ☆33Updated last year
• huangzhii / IMPRESS
  ☆20Updated 2 years ago
• TissueImageAnalytics / iguana
  Interpretable Gland-Graph Networks
  ☆22Updated last year
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 3 weeks ago
• markowetzlab / pathml-tutorial
  A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…
  ☆24Updated 3 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆58Updated 2 years ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 3 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆79Updated last year