khtao / StainNetLinks
StainNet: a fast and robust stain normalization network
☆50Updated 3 years ago
Alternatives and similar repositories for StainNet
Users that are interested in StainNet are comparing it to the libraries listed below
Sorting:
- Stain normalization tools for histological analysis and computational pathology☆155Updated 9 months ago
- Some stain normalization code☆91Updated 3 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆57Updated 3 years ago
- ☆65Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆94Updated 11 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated this week
- Histopathology Image Analysis☆92Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆23Updated 2 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆141Updated 4 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆154Updated last year
- Pretrained model for self supervised histopathology☆120Updated 3 years ago
- Pix2Pix-based Stain-to-Stain Translation: A Solution for Robust Stain Normalization in Histopathology Images Analysis☆34Updated 5 years ago
- Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms☆36Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated 10 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated this week
- H&E histopathological staining normalization☆109Updated 5 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆168Updated 3 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆67Updated 2 years ago
- ☆67Updated 4 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆61Updated 4 years ago
- ☆37Updated 2 years ago
- ☆101Updated last year
- ☆71Updated 4 years ago
- ☆46Updated 3 years ago
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- List of pathology feature extractors and foundation models☆154Updated 4 months ago