Alternatives and similar repositories for HiPS:

Users that are interested in HiPS are comparing it to the libraries listed below

• PathologyDataScience / MuTILs_Panoptic
  Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…
  ☆17Updated 3 weeks ago
• vqdang / H2T
  ☆35Updated 2 years ago
• taliq / TEA-graph
  First commit
  ☆61Updated 2 years ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆96Updated 4 months ago
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆25Updated last year
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• wangxiaodong1021 / HCC_Prognostic
  Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning
  ☆42Updated 4 years ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆68Updated last year
• DIAGNijmegen / pathology-hooknet-tls
  ☆13Updated 4 months ago
• qinghezeng / Histo2GeneSignatures
  Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images
  ☆20Updated 8 months ago
• AIRMEC / HECTOR
  Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.
  ☆38Updated 3 months ago
• Biooptics2021 / PathFinder
  ☆51Updated last year
• wenqi006 / SlideGraph
  ☆52Updated 3 years ago
• MWod / DeeperHistReg
  DeeperHistReg - Source Code
  ☆52Updated 11 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆66Updated 2 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆93Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆57Updated 6 months ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆68Updated this week
• kmboehm / orpheus
  ☆11Updated last month
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆36Updated last year
• lucasrla / wsi-tile-cleanup
  Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning
  ☆27Updated 4 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆52Updated last year
• olgarithmics / ICLR_CAMIL
  ☆25Updated 2 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 2 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated last year
• uta-smile / DeepAttnMISL
  Contains codes of DeepAttnMISL in MEDIA'20
  ☆57Updated 4 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆58Updated last month
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆31Updated 2 years ago
• mahmoodlab / Patch-GCN
  Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
  ☆143Updated 10 months ago
• sdw95927 / Ceograph
  CEll spatial Organization-based graph convolutional network
  ☆24Updated last year