PathologyDataScience / HiPSLinks
Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
☆32Updated last year
Alternatives and similar repositories for HiPS
Users that are interested in HiPS are comparing it to the libraries listed below
Sorting:
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆27Updated 5 months ago
- ☆57Updated 4 years ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated 2 years ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆131Updated last week
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆160Updated last year
- Tools to build deep learning pipelines.☆113Updated last year
- ☆38Updated 2 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- First commit☆65Updated 3 years ago
- ☆31Updated last year
- ☆57Updated 2 years ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆113Updated 11 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆72Updated 3 years ago
- Histopathology Image Analysis☆93Updated 2 years ago
- ☆42Updated last week
- Code from Foersch et al. (Under Construction / Development)☆38Updated 2 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 5 years ago
- ☆67Updated last year
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆80Updated last year
- ☆71Updated 4 years ago
- ☆103Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆109Updated 2 months ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆43Updated 8 months ago
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆108Updated last month
- Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms☆39Updated last week
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆57Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆80Updated last month
- Re-stained whole slide image alignment☆36Updated 2 years ago