Pretrained model for self supervised histopathology
☆121Jun 27, 2022Updated 3 years ago
Alternatives and similar repositories for self-supervised-histopathology
Users that are interested in self-supervised-histopathology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official code for "Improving Self-supervised Learning with Hardness-aware Dynamic Curriculum Learning: An Application to Digital Patholog…☆17Oct 15, 2021Updated 4 years ago
- This is the official code for the paper Learning Represenations with Contrastive Self-Supervised Learning for Histopathology Applications☆13Aug 17, 2022Updated 3 years ago
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆143Jun 9, 2022Updated 3 years ago
- Data and code to accompany our Nature publication☆49May 3, 2022Updated 4 years ago
- ☆16Jan 18, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 2 years ago
- ☆37Feb 16, 2023Updated 3 years ago
- MICCAI2021 Paper: Self-supervised visual representation learning for histopathological images☆27Aug 29, 2022Updated 3 years ago
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆61Mar 5, 2022Updated 4 years ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆528Updated this week
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆13Apr 8, 2023Updated 3 years ago
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆465Apr 29, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆270Dec 23, 2023Updated 2 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Nov 3, 2022Updated 3 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆56Apr 4, 2022Updated 4 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆59Oct 12, 2021Updated 4 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆114Nov 8, 2025Updated 6 months ago
- Powerful, open-source AI tools for digital pathology.☆362May 7, 2026Updated 3 weeks ago
- Open source tools for computational pathology - Nature BME☆1,678Apr 14, 2025Updated last year
- A Python toolkit for pathology image analysis algorithms.☆470Apr 6, 2026Updated last month
- ☆71Sep 23, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification☆483May 3, 2024Updated 2 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆325Apr 13, 2026Updated last month
- Library for Digital Pathology Image Processing☆457May 21, 2026Updated last week
- Handling whole-slide images with region-level annotations.☆10Jan 14, 2019Updated 7 years ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆170Jan 29, 2024Updated 2 years ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆113Jun 9, 2023Updated 2 years ago
- ☆19Jul 28, 2021Updated 4 years ago
- ☆360Mar 29, 2025Updated last year
- Histopathology Feature Extractors (2024)☆14Jun 14, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆715Oct 27, 2023Updated 2 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆116Jan 24, 2025Updated last year
- Released code for the paper 'End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma'☆10Nov 24, 2021Updated 4 years ago
- ☆50May 9, 2022Updated 4 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆181Apr 1, 2022Updated 4 years ago
- Train a model to predict gene expression from histology slides.☆111Jul 6, 2022Updated 3 years ago