Alternatives and similar repositories for molgenis-emx2:

Users that are interested in molgenis-emx2 are comparing it to the libraries listed below

• ga4gh-beacon / beacon-v2
  Unified repository for the GA4GH Beacon v2 API standard
  ☆29Updated last week
• PapenfussLab / PathOS
  PathOS is a clinical application for filtering, analysing and reporting on NGS variants
  ☆28Updated 4 years ago
• fairgenomes / fairgenomes-semantic-model
  FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
  ☆12Updated 2 months ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆22Updated 3 months ago
• ccmbioinfo / crg2
  Research pipeline for exploring clinically relevant genomic variants
  ☆15Updated 2 weeks ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆16Updated 9 months ago
• dnanexus / wdlTools
  WDL tools for parsing, type-checking, and more
  ☆25Updated 2 weeks ago
• fikipollo / paintomics3
  Integrative visualization of multiple omic datasets onto KEGG pathways.
  ☆11Updated 3 years ago
• ELIXIR-Belgium / ena-upload-container
  This is a repository to build a Galaxy container which can be used to remove human traces from sequence reads and upload raw SARS-Cov-2 s…
  ☆10Updated last year
• microbiomedata / nmdc-metadata
  Managing metadata and policy around metadata in NMDC
  ☆2Updated last year
• galaxyproject / idc
  Simon's Data Club - Reference data for Galaxy servers
  ☆10Updated last year
• elixir-europe / biohackathon-projects-2024
  Project code for BioHackathon Europe 2024.
  ☆21Updated 5 months ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• MultiQC / test-data
  Test data for MultiQC.
  ☆22Updated 2 weeks ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• PharmGKB / pgkb-ngs-pipeline
  PharmGKB NGS Pipeline
  ☆17Updated 6 years ago
• goeckslab / isoseq-browser
  ☆13Updated 7 years ago
• Steven-N-Hart / vcf-miner
  VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files
  ☆37Updated 5 years ago
• SouthGreenPlatform / TOGGLE
  Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis
  ☆18Updated 2 years ago
• TheJacksonLaboratory / LIRICAL
  LIkelihood Ratio Interpretation of Clinical AbnormaLities
  ☆27Updated 2 months ago
• pasted / clinical_variant_database
  Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…
  ☆10Updated 7 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆20Updated 5 years ago
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 8 years ago
• ImperialCardioGenetics / frequencyFilter
  Allele frequency filtering for Mendelian variant discovery
  ☆17Updated 8 years ago
• galaxyproject / awesome-galaxy
  Awesome resources related to Galaxy project
  ☆12Updated 5 months ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆20Updated 2 years ago
• ENCODE-DCC / demo-pipeline
  ☆11Updated 4 years ago
• ncbi / pipelines
  ☆14Updated 6 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 6 years ago