Alternatives and similar repositories for beacon-v2:

Users that are interested in beacon-v2 are comparing it to the libraries listed below

• montilab / nf-gwas-pipeline
  A Nextflow Genome-Wide Association Study (GWAS) Pipeline
  ☆33Updated last month
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• grst / snakemake_nextflow_wdl
  simple comparison of snakemake, nextflow and cromwell/wdl
  ☆50Updated 4 years ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 2 years ago
• TheJacksonLaboratory / CloudNeo
  CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens
  ☆19Updated 5 years ago
• seqeralabs / nf-dragen
  POC Nextflow pipeline to run Illumina DRAGEN software
  ☆11Updated last week
• jackhump / leafviz
  Just the leafviz parts of Leafcutter
  ☆13Updated 2 years ago
• astrazeneca-cgr-publications / JARVIS
  JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
  ☆22Updated last month
• linsalrob / SRA_Metadata
  Get, parse, and extract information from the SRA metadata files
  ☆38Updated 2 years ago
• HGNC / get-gene-info
  Retrieving HGNC gene symbol reports (human genes only) via a list of gene IDs.
  ☆19Updated 2 years ago
• s-andrews / SeqMonk
  SeqMonk NGS visualisation and analysis tool
  ☆49Updated last month
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆40Updated this week
• gatk-workflows / gatk4-jupyter-notebook-tutorials
  This repository contains Jupyter Notebooks containing GATK Best Practices Workflows
  ☆26Updated 5 years ago
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆29Updated 2 years ago
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆51Updated last month
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆42Updated last year
• carpentries-incubator / workflows-nextflow
  Workflow management with Nextflow and nf-core
  ☆25Updated last month
• sschmeier / genomics
  Sphinx documentation source for a computational genomics tutorial.
  ☆33Updated 4 years ago
• chanzuckerberg / idseq-workflows
  Portable WDL workflows for IDseq production pipelines
  ☆31Updated 3 years ago
• macarthur-lab / omim
  Repo for downloading and storing OMIM data
  ☆18Updated 8 years ago
• cancervariants / metakb
  Central repository for the VICC metakb web application
  ☆15Updated this week
• gtrichard / deepStats
  deepStats: a stastitical toolbox for deeptools and genomic signals
  ☆34Updated 3 years ago
• Boehringer-Ingelheim / dso
  Data Science Operations (dso) command line tool
  ☆29Updated last week
• EBIvariation / CMAT
  ClinVar Mapping and Annotation Toolkit
  ☆19Updated 2 weeks ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆64Updated 2 months ago
• esacinc / PDC-Public
  The public repository for the Proteomic Data Commons UI and APIs
  ☆13Updated 9 months ago
• lifebit-ai / GATK
  Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices
  ☆12Updated 5 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• bio-ontology-research-group / phenomenet-vp
  A phenotype-based tool for variant prioritization in WES and WGS data
  ☆37Updated 2 years ago
• PGDX / cerebro-paper
  ☆23Updated 6 years ago