Alternatives and similar repositories for fairgenomes-semantic-model

Users that are interested in fairgenomes-semantic-model are comparing it to the libraries listed below

• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆15Updated last year
• MaayanLab / FAIRshake
  ☆10Updated 2 months ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆17Updated last year
• ga4gh-discovery / data-connect
  Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
  ☆24Updated last year
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆15Updated 2 weeks ago
• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆23Updated 6 years ago
• moonso / ped_parser
  A python tool for parsing pedigree files
  ☆16Updated 8 years ago
• griffithlab / civic-meeting
  Repo for advertising and organizing CIViC unconference/meeting activities
  ☆10Updated 3 months ago
• datacarpentry / genomics-r-intro
  Intro to R and RStudio for Genomics
  ☆30Updated this week
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆67Updated 3 years ago
• datacarpentry / cloud-genomics
  Introduction to Cloud Computing for Genomics
  ☆21Updated this week
• fikipollo / paintomics3
  Integrative visualization of multiple omic datasets onto KEGG pathways.
  ☆11Updated 4 years ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆27Updated last year
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated this week
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated 2 years ago
• jlanga / smsk
  Snakemake skeleton - Build workflows with Snakemake
  ☆19Updated last year
• monarch-initiative / monarchr
  R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.
  ☆16Updated this week
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• opencb / iva
  Generic Interactive Variant Analysis browser
  ☆29Updated 3 years ago
• nmdp-bioinformatics / dash
  Data Standards Hackathon for NGS based typing.
  ☆14Updated 2 months ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆26Updated 4 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• 5c077 / ExpressionDB
  App for hosting gene expression/ontology data with Shiny
  ☆17Updated 7 years ago
• disq-bio / disq
  A library for manipulating bioinformatics sequencing formats in Apache Spark
  ☆32Updated 2 months ago
• ImperialCardioGenetics / frequencyFilter
  Allele frequency filtering for Mendelian variant discovery
  ☆18Updated 9 years ago
• miniwdl-ext / miniwdl-aws
  Extends miniwdl to run workflows on AWS Batch & EFS
  ☆22Updated last year
• broadinstitute / seqr-loading-pipelines
  hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
  ☆23Updated this week
• bihealth / sodar-core-legacy
  LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.
  ☆15Updated 3 years ago
• arpcard / aro
  The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …
  ☆20Updated last month
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 8 years ago