A4Bio / RDesign
The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
☆39Updated 5 months ago
Alternatives and similar repositories for RDesign:
Users that are interested in RDesign are comparing it to the libraries listed below
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆170Updated last year
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆172Updated 4 months ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Updated last year
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆83Updated 6 months ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆91Updated last year
- ☆39Updated 2 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆57Updated 3 months ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆36Updated 3 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025☆51Updated 2 weeks ago
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Updated last year
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆27Updated 2 years ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆77Updated 9 months ago
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆27Updated 4 months ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆58Updated 6 months ago
- Implementation for ICML 2024 paper "MolCRAFT: Structure-Based Drug Design in Continuous Parameter Space"☆82Updated 4 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆99Updated 9 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆70Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆42Updated 3 weeks ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆83Updated last year
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆84Updated last year
- Papers about Structure-based Drug Design (SBDD)☆92Updated last month
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.☆73Updated 3 weeks ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆26Updated 11 months ago
- FABind: Fast and Accurate Protein-Ligand Binding (NeurIPS 2023)☆120Updated 6 months ago
- Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"☆31Updated 8 months ago
- ☆21Updated this week
- The official implementation of DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design (ICML 2023)☆55Updated last year
- Implementation for ICLR2024 Oral paper "Unified Generative Modeling of 3D Molecules with Bayesian Flow Networks"☆44Updated 7 months ago
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆91Updated 7 months ago