The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
☆51Aug 22, 2024Updated last year
Alternatives and similar repositories for RDesign
Users that are interested in RDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆89Jul 20, 2024Updated 2 years ago
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 3 years ago
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆203Sep 18, 2024Updated last year
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 3 years ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Feb 21, 2023Updated 3 years ago
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆29Jun 22, 2022Updated 4 years ago
- The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".☆49Mar 19, 2025Updated last year
- ☆10Feb 22, 2023Updated 3 years ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.☆300Feb 21, 2023Updated 3 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆64Nov 8, 2024Updated last year
- OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning☆1,128Mar 1, 2026Updated 4 months ago
- ☆14May 25, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆78Feb 11, 2025Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- some methods about automated thermography defects detection☆21Nov 16, 2023Updated 2 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆83Aug 11, 2024Updated last year
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Feb 8, 2025Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆68May 8, 2026Updated 2 months ago
- ☆42Aug 1, 2025Updated 11 months ago
- ☆30Feb 20, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The official implementation of the ACM MM'21 paper Co-learning: Learning from noisy labels with self-supervision.☆123May 17, 2022Updated 4 years ago
- ☆24Nov 6, 2024Updated last year
- ☆16Aug 17, 2025Updated 11 months ago
- The codebase for EnzyGen2☆30Apr 20, 2026Updated 3 months ago
- Segment Anything in Defect Detection☆23Jun 2, 2024Updated 2 years ago
- ☆40Dec 16, 2022Updated 3 years ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆42Oct 8, 2024Updated last year
- In-silico design pipeline for evaluating protein structure diffusion models.☆31Jun 25, 2024Updated 2 years ago
- ☆12Apr 6, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This mathematics course is taught for the first year Ph.D. students of computer science and related areas @zju☆30Apr 27, 2021Updated 5 years ago
- Toolkit for structure-based deep learning on RNA.☆45Updated this week
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆309Dec 16, 2025Updated 7 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Apr 8, 2026Updated 3 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆43Sep 12, 2024Updated last year
- SynthEHRella is a benchmarking package used for evaluating synthetic Electronic Health Records (EHR) data generation methods.☆18Sep 17, 2025Updated 10 months ago
- Ctrl-DNA: Controllable Cell-Type-Specific Regulatory DNA Design via Constrained RL☆20May 28, 2025Updated last year