A4Bio / RDesignLinks
The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
☆49Updated 11 months ago
Alternatives and similar repositories for RDesign
Users that are interested in RDesign are comparing it to the libraries listed below
Sorting:
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆186Updated 10 months ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆177Updated 2 years ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Updated 2 years ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆98Updated last year
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆90Updated 6 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆96Updated 2 years ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆42Updated 10 months ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆66Updated last year
- Code and Data for the paper: Multi-level Protein Structure Pre-training with Prompt Learning [ICLR 2023]☆33Updated 2 years ago
- ☆42Updated 2 years ago
- Source code of PETA: Evaluating the Impact of Protein Transfer Learning with Sub-word Tokenization on Downstream Applications.☆33Updated 2 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆114Updated 5 months ago
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆86Updated last year
- ☆17Updated last year
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆53Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆69Updated last month
- ☆54Updated 11 months ago
- ☆198Updated 10 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆89Updated 2 months ago
- ☆38Updated 2 months ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆130Updated 2 months ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆11Updated last year
- ☆74Updated 5 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆65Updated 11 months ago
- The first large protein language model trained follows structure instructions.☆84Updated 2 months ago
- ☆77Updated 2 months ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Updated 6 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆224Updated 2 weeks ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆109Updated last year
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆220Updated 3 months ago