The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design.
☆50Aug 22, 2024Updated 2 years ago
Alternatives and similar repositories for RDesign
Users that are interested in RDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching P…☆88Jul 20, 2024Updated 2 years ago
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 3 years ago
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆205Sep 18, 2024Updated last year
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 3 years ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Feb 21, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆29Jun 22, 2022Updated 4 years ago
- The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".☆49Mar 19, 2025Updated last year
- ☆10Feb 22, 2023Updated 3 years ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- The official implementation of the CVPR'22 paper SimVP: Simpler Yet Better Video Prediction.☆301Feb 21, 2023Updated 3 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆65Nov 8, 2024Updated last year
- OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning☆1,140Mar 1, 2026Updated 6 months ago
- ☆14May 25, 2022Updated 4 years ago
- ☆77Feb 11, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- some methods about automated thermography defects detection☆21Nov 16, 2023Updated 2 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆85Aug 11, 2024Updated 2 years ago
- ☆28Jul 21, 2026Updated last month
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Feb 8, 2025Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆70May 8, 2026Updated 3 months ago
- ☆44Aug 1, 2025Updated last year
- Drug Discovery Intelligence plugin for Claude Code. AI-powered target validation, competitive intelligence, literature analysis & clinic…☆18Jan 4, 2026Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆30Feb 20, 2024Updated 2 years ago
- ☆24Nov 6, 2024Updated last year
- ☆17Aug 17, 2025Updated last year
- The codebase for EnzyGen2☆30Apr 20, 2026Updated 4 months ago
- Segment Anything in Defect Detection☆23Jun 2, 2024Updated 2 years ago
- ☆40Dec 16, 2022Updated 3 years ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆42Oct 8, 2024Updated last year
- In-silico design pipeline for evaluating protein structure diffusion models.☆32Jun 25, 2024Updated 2 years ago
- ☆12Apr 6, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Feb 14, 2023Updated 3 years ago
- This mathematics course is taught for the first year Ph.D. students of computer science and related areas @zju☆30Apr 27, 2021Updated 5 years ago
- Toolkit for structure-based deep learning on RNA.☆46Updated this week
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆318Dec 16, 2025Updated 8 months ago
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆111Nov 20, 2025Updated 9 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Aug 10, 2026Updated 3 weeks ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆44Sep 12, 2024Updated last year