Course material for introductory R / Bioconductor courses
☆44Mar 15, 2023Updated 2 years ago
Alternatives and similar repositories for BiocIntro
Users that are interested in BiocIntro are comparing it to the libraries listed below
Sorting:
- ☆10May 17, 2017Updated 8 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Jul 26, 2017Updated 8 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- Bioconductor facilities for parallel evaluation☆69Oct 30, 2025Updated 3 months ago
- Training material for intermediate R / Bioconductor courses☆17Mar 15, 2023Updated 2 years ago
- ☆13Aug 14, 2017Updated 8 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 2 years ago
- ☆19Jul 6, 2023Updated 2 years ago
- 软件方面的包 (包括各种芯片数据处理，NGS数据处理，差异分析等等！)☆14Apr 23, 2016Updated 9 years ago
- 2018 Bioconductor Workshops☆76May 15, 2019Updated 6 years ago
- Gene Expression Omnibus Analysis with Shiny☆40Jun 2, 2022Updated 3 years ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- R package for bcbio RNA-seq analysis.☆63Sep 9, 2024Updated last year
- From IDAT to beta.☆25Jul 13, 2018Updated 7 years ago
- EpiGenome Gateway - WashU EpiGenome Browser☆21Oct 11, 2021Updated 4 years ago
- DESeq2 or edgeR☆22Sep 28, 2016Updated 9 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Nov 13, 2025Updated 3 months ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Feb 3, 2026Updated 3 weeks ago
- Genetics training camp☆21Sep 8, 2020Updated 5 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 8 years ago
- The Bioconductor Build System☆12Feb 6, 2026Updated 3 weeks ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- ☆11Sep 5, 2018Updated 7 years ago
- Shiny browser for single cell RNAseq data☆12Oct 7, 2022Updated 3 years ago
- Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…☆13Nov 16, 2015Updated 10 years ago
- 《Beginning Perl for Bioinformatics》中译本☆29Aug 29, 2019Updated 6 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Dec 15, 2020Updated 5 years ago
- Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html☆13Feb 23, 2018Updated 8 years ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 4 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆30Nov 25, 2020Updated 5 years ago
- variant discovery and annotation using GATK and Ensembl☆17Jun 27, 2013Updated 12 years ago
- Scripts accompanying "Microanatomy of the human atherosclerotic plaque by single-cell transcriptomics"☆12Apr 20, 2022Updated 3 years ago
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 6 months ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 2 years ago