Alternatives and similar repositories for django-blastplus

Users that are interested in django-blastplus are comparing it to the libraries listed below

• sfu-compbio / sinvict
  SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA
  ☆27Updated 5 years ago
• bioinform / metasv
  MetaSV: An accurate and integrative structural-variant caller for next generation sequencing
  ☆59Updated 8 years ago
• nspies / svviz2
  for visual evaluation of read support for structural variation
  ☆55Updated last year
• pughlab / ConsensusCruncher
  ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…
  ☆21Updated 3 years ago
• chrisamiller / readDepth
  R package for inferring copy number from read depth
  ☆32Updated 3 years ago
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆89Updated 6 years ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆42Updated 4 months ago
• macarthur-lab / igv_utils
  utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.
  ☆49Updated 6 years ago
• lpryszcz / bin
  My bioinfo toolbox
  ☆50Updated 11 months ago
• moonso / vcf_parser
  Simple vcf parser, based on PyVCF
  ☆48Updated 7 years ago
• dzerbino / oases
  De novo transcriptome assembler for short reads
  ☆64Updated 7 years ago
• andyrimmer / Platypus
  Platypus Variant Caller
  ☆108Updated last year
• stephenfloor / extract-transcript-regions
  For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…
  ☆36Updated 2 years ago
• Ettwiller / Damage-estimator
  Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…
  ☆54Updated 8 years ago
• tao-bioinfo / gff3sort
  GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
  ☆51Updated 5 years ago
• FusionInspector / FusionInspector
  FusionInspector code
  ☆58Updated 4 months ago
• gatk-workflows / broad-prod-wgs-germline-snps-indels
  Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…
  ☆57Updated 5 years ago
• PacificBiosciences / barcoding
  Lima - Demultiplex Barcoded PacBio Samples
  ☆67Updated 8 months ago
• cc2qe / vawk
  An awk-like VCF parser
  ☆56Updated 2 years ago
• genome-in-a-bottle / giab_data_analysis
  This repository contains information about ongoing analysis performed by GIAB
  ☆14Updated 6 years ago
• WGLab / SeqMule
  Automated human exome/genome variants detection from FASTQ files
  ☆23Updated 4 years ago
• bgruening / galaxy-rna-workbench
  Galaxy RNA workbench
  ☆41Updated 5 years ago
• Genotek / ClassifyCNV
  ClassifyCNV: a tool for clinical annotation of copy-number variants
  ☆69Updated 2 years ago
• inodb / snakemake-workflows
  An experimental repo for common snakemake rules and workflows
  ☆46Updated 10 years ago
• pwwang / vcfstats
  Powerful statistics for VCF files
  ☆73Updated 2 months ago
• fls-bioinformatics-core / GFFUtils
  Python module and utility programs for working with GFF files
  ☆33Updated 5 years ago
• seppinho / mutserve
  mtDNA Variant Caller
  ☆35Updated last year
• RahmanTeam / DECoN
  ☆54Updated 3 years ago
• soccin / BIC-variants_pipeline
  BIC@MSKCC Variants Pipeline
  ☆23Updated 2 years ago
• bioinfo-pf-curie / TMB
  Tumor Mutational Burden
  ☆63Updated 5 months ago