Alternatives and similar repositories for R_notes

Users that are interested in R_notes are comparing it to the libraries listed below

• mdozmorov / MDnotes
  Links to all data science, genomics, and other notes
  ☆55Updated last week
• uc-bd2k / GREP2
  GEO RNA-seq Experiments Processing Pipeline
  ☆22Updated 6 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆37Updated last year
• Papatheodorou-Group / CATD_snakemake
  Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…
  ☆15Updated 8 months ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆24Updated 6 months ago
• Shamir-Lab / INTEND
  INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset…
  ☆12Updated 3 years ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated 11 months ago
• schultzelab / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆21Updated 6 years ago
• dzhang32 / dasper
  Detecting Aberrant Splicing Events from RNA-sequencing data
  ☆16Updated last year
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated 2 months ago
• boulderrinnlab / CLASS_2021
  Statistical and computational analysis of the human genome
  ☆15Updated 4 years ago
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆31Updated 4 years ago
• dzhakparov / GeneSelectR
  ☆23Updated last year
• zhiyhu / scFT-paper
  Z Hu et al. The repertoire of serous ovarian cancer non-genetic heterogeneity revealed by single-cell sequencing of normal fallopian tube…
  ☆13Updated 5 years ago
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆53Updated 3 months ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• maxplanck-ie / 10X_snakepipe
  A snakemake pipeline for 10X genomics cellranger
  ☆22Updated 2 months ago
• grimmlab / BookChapter-RNA-Seq-Analyses
  Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis
  ☆40Updated 4 years ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆21Updated 3 months ago
• kircherlab / cfDNA
  cfDNA analysis workflow
  ☆23Updated 2 years ago
• hakyimlab / gtex-gwas-analysis
  ☆24Updated 4 years ago
• mdozmorov / HiCcompareWorkshop
  Differential Hi-C Data Analysis Workshop https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.76
  ☆15Updated 4 years ago
• griffithlab / pmbio.org
  Website for the precision medicine workshop
  ☆46Updated last month
• interactivereport / xOmicsShiny
  xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …
  ☆34Updated last month
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 6 years ago
• fmicompbio / monaLisa
  binned motif enrichment analysis and visualisation
  ☆43Updated 2 months ago
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆38Updated 6 years ago
• alserglab / phantasus
  Visual exploratory analysis of gene expression data
  ☆44Updated last month
• NBISweden / workshop-mlbiostatistics
  Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
  ☆16Updated 3 weeks ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 4 years ago