upsetjs / upsetjs_jupyter_widget
π Jupyter Widget bindings for UpSet.js for rendering UpSet plots, Euler, and Venn Diagrams
β14Updated 2 years ago
Related projects β
Alternatives and complementary repositories for upsetjs_jupyter_widget
- A Jupyter wrapper for the igv.js library (representation of genomic data)β26Updated 3 years ago
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversionβ9Updated 4 years ago
- Snakemake-like pipeline manager for reproducible Jupyter Notebooksβ17Updated 3 years ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.β11Updated 4 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.β15Updated 2 years ago
- Functional enrichment terms aggregatorβ17Updated 7 months ago
- jinja2-enabled jupyter notebooksβ35Updated 3 months ago
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatioβ¦β12Updated this week
- β21Updated last year
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Dataβ16Updated last year
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Pythonβ21Updated last year
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.β14Updated last week
- Render HTML reports from parametrized jupyter notebooks or Rmarkdown documents.β10Updated 3 weeks ago
- HuBMAP Data Portal front endβ12Updated this week
- β11Updated this week
- The documentation for the Clustergrammer projectβ10Updated 4 years ago
- Map your disease and phenotype terms to the Open Targets platform ontologyβ20Updated 2 months ago
- SciWiki: Collective KnowledgeBase for Scientific Data and Useβ37Updated this week
- Proteins as words, genomes as documents.β20Updated 4 years ago
- The R package manager that is blazingly fast β‘. Powered by mamba.β72Updated 2 years ago
- A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).β20Updated 7 years ago
- Issue tracker for Open Targets Platform and Open Targets Genetics Portalβ12Updated 2 months ago
- SparkBLAST is a parallelization of a sequence alignment application (BLAST) that employs cloud computing for the provisioning of computatβ¦β9Updated 7 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.β12Updated 3 years ago
- Short course using RStudio for biological data analysisβ13Updated 2 years ago
- CPU and GPU deterministic and therefore fully reproducible machine learning pipelines using MLflow.β46Updated last year
- Discoverability for gene searchβ12Updated last year
- Utilities for manipulating chromosome names, including modifying them to follow a particular naming styleβ31Updated last week
- Platform for integrating genomic analysis with Jupyter Notebooks.β44Updated 3 months ago