mbourgey / EBI_cancer_workshop_SNVLinks
☆15Updated 2 years ago
Alternatives and similar repositories for EBI_cancer_workshop_SNV
Users that are interested in EBI_cancer_workshop_SNV are comparing it to the libraries listed below
Sorting:
- hands-on for NGS/SNParray CNV call trainning☆17Updated 2 years ago
- a set of NGS pipelines☆24Updated last week
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- Genomic data interpretation and visualization Workshop☆20Updated last week
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆22Updated 6 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- ☆21Updated 9 months ago
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆24Updated 2 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 8 years ago
- ☆16Updated this week
- a Shiny/R application to view and annotate copy number variations☆27Updated 2 years ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- EBI cancer workshop course materials☆20Updated 3 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆42Updated 3 years ago
- Adapters for trimming☆30Updated 6 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆15Updated 4 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆26Updated last month
- ☆23Updated 4 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago