mbourgey / EBI_cancer_workshop_SNV
☆15Updated 2 years ago
Alternatives and similar repositories for EBI_cancer_workshop_SNV:
Users that are interested in EBI_cancer_workshop_SNV are comparing it to the libraries listed below
- hands-on for NGS/SNParray CNV call trainning☆17Updated 2 years ago
- a set of NGS pipelines☆24Updated 3 weeks ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆31Updated 8 years ago
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- Merge fastq files split over lanes☆20Updated 6 years ago
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆24Updated 2 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- Adapters for trimming☆30Updated 5 years ago
- Genomic data interpretation and visualization Workshop☆19Updated last year
- EBI cancer workshop course materials☆20Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated 2 weeks ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 8 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- ☆21Updated last month
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Summer school course materials collection☆25Updated 6 years ago
- R package wrapping bedtools☆38Updated 4 months ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- DriverPower☆26Updated this week
- ☆21Updated 4 months ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆16Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Multi-sample cancer phylogeny reconstruction☆34Updated 7 years ago
- RNA-seq workflow: differential transcript usage☆20Updated last year
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 2 years ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- Genomic Association Tester☆30Updated last year
- Personal diploid genome creation and coordinate conversion☆22Updated 3 months ago