mbourgey / EBI_cancer_workshop_SNVLinks
☆17Updated 3 years ago
Alternatives and similar repositories for EBI_cancer_workshop_SNV
Users that are interested in EBI_cancer_workshop_SNV are comparing it to the libraries listed below
Sorting:
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆26Updated 3 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- ☆78Updated 11 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- hands-on for NGS/SNParray CNV call trainning☆20Updated 3 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- Multi-sample somatic variant caller☆52Updated 3 years ago
- Adapters for trimming☆30Updated 6 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated this week
- Run Picard on BAM files and collate 90 metrics into one file.☆40Updated 8 years ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Make rapid visualizations of RNA-seq data in R☆19Updated 2 months ago
- a set of NGS pipelines☆24Updated 3 weeks ago
- ☆39Updated 4 years ago
- Convert BAM files to bigWig files with a simple command☆20Updated 7 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 8 years ago
- Command-line utility to color objects of a KEGG pathway with arbitrary colors☆34Updated 10 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆38Updated 2 years ago
- A program for summarising CpG methylation patterns☆20Updated 9 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆33Updated 3 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- Evolutionary Transcriptomics with R☆49Updated last month
- Pipeline for Phylostratigraphy☆13Updated 3 years ago