Alternatives and similar repositories for globalign

Users that are interested in globalign are comparing it to the libraries listed below

• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆59Updated 5 months ago
• MIDA-group / inspire
  INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
  ☆12Updated 4 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated last week
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆76Updated 2 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆57Updated 6 months ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆53Updated last month
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆34Updated 2 years ago
• chunglabmit / pystripe
  An image processing package for removing streaks from SPIM images
  ☆38Updated last year
• lens-biophotonics / ZetaStitcher
  ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
  ☆46Updated last month
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated 2 years ago
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆39Updated 2 weeks ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 9 months ago
• glichtner / pystackreg
  A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
  ☆92Updated last year
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated last month
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆32Updated 2 years ago
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆35Updated 2 weeks ago
• guiwitz / napari_demo
  ☆23Updated 4 years ago
• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 4 years ago
• MIDA-group / py_alpha_amd_release
  Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release
  ☆20Updated 6 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated 3 weeks ago
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆138Updated 2 months ago
• clij / clij2-fft
  ☆25Updated last week
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated 2 weeks ago
• imaris / ImarisWriter
  ☆38Updated last year
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆87Updated last week
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆30Updated 3 weeks ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆27Updated 10 months ago
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated 7 months ago