Alternatives and similar repositories for globalign

Users that are interested in globalign are comparing it to the libraries listed below

• MIDA-group / inspire
  INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
  ☆12Updated 4 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 3 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆58Updated 4 months ago
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆76Updated 2 years ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆53Updated last week
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆39Updated this week
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• chunglabmit / pystripe
  An image processing package for removing streaks from SPIM images
  ☆37Updated last year
• lens-biophotonics / ZetaStitcher
  ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
  ☆45Updated this week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 8 months ago
• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 3 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆56Updated 4 months ago
• imaris / ImarisWriter
  ☆38Updated last year
• glichtner / pystackreg
  A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
  ☆91Updated last year
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated 2 years ago
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆138Updated last month
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆33Updated 2 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆70Updated 2 weeks ago
• clij / clij2-fft
  ☆25Updated 3 months ago
• khaledkhairy / EM_aligner
  A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.
  ☆14Updated 6 years ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆27Updated 9 months ago
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆35Updated last month
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• mritools / cupyimg
  CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image
  ☆46Updated 4 years ago
• VolkerH / DaskFusion
  Fusing image tiles with dask array's map_blocks
  ☆30Updated last year
• juglab / napari-n2v
  A self-supervised denoising algorithm.
  ☆28Updated last year
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated this week
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆32Updated 2 years ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆34Updated last year
• MIDA-group / py_alpha_amd_release
  Py-Alpha-AMD Registration Framework - Robust Image Registration - Public Release
  ☆20Updated 6 years ago