Variational Auto-Encoder that generates synthetic gene expression data
☆25Apr 7, 2023Updated 3 years ago
Alternatives and similar repositories for rna-seq-vae
Users that are interested in rna-seq-vae are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Package to preprocess ontologies and train OntoVAE models.☆16Jan 7, 2025Updated last year
- A computation framework designed to detect differential junctions usage between two groups at single cell level☆13Feb 1, 2021Updated 5 years ago
- This is the repository for the single-cell transcriptomics application of the Deep Generative Decoder (DGD), developed by the Krogh group…☆14Aug 8, 2024Updated 2 years ago
- ☆16Jun 8, 2023Updated 3 years ago
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆10Sep 7, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- ☆12Jul 11, 2022Updated 4 years ago
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- rf☆13Jul 29, 2026Updated 2 months ago
- Correlation-based approach for identification of endocrine interactions☆14Jan 18, 2022Updated 4 years ago
- ☆13May 10, 2021Updated 5 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Iterative Random Forest based on the Ranger Code Base☆10Sep 14, 2021Updated 5 years ago
- Contextual Vision Transformers for Robust Representation Learning☆15Oct 19, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Jan 8, 2024Updated 2 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Streaming responses with Streamlit, ChatGPT and Langchain.☆11Apr 7, 2023Updated 3 years ago
- ☆18Jun 24, 2024Updated 2 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 3 years ago
- ☆13May 25, 2025Updated last year
- Fog Prediction using 3D CNN with dense block and attention☆19Jul 17, 2024Updated 2 years ago
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆13Feb 26, 2024Updated 2 years ago
- ☆13May 13, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cell signatures, with confidence.☆10Jun 1, 2020Updated 6 years ago
- This is a simple variational autoencoder (VAE) implemented in torch for R☆11Jan 4, 2022Updated 4 years ago
- Drug Response Estimation from single-cell Expression Profiles☆13Jan 5, 2024Updated 2 years ago
- Taiga for Dataset management☆12May 5, 2026Updated 5 months ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js …☆12Nov 8, 2025Updated 11 months ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Dec 7, 2021Updated 4 years ago
- A set of tools to rank molecular pairs by their similarity to components of co-crystal reported in the CSD.☆11Jan 14, 2022Updated 4 years ago
- A quick recap of widely used differential analyses methods in R for RNA-seq experiments☆16Dec 7, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package for bayesNMf, a computationally efficient Gibbs sampler for Bayesian Poisson NMF which automatically determines the number of l…☆12Oct 26, 2025Updated 11 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆70Oct 2, 2026Updated 2 weeks ago
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆15Updated this week
- Engaging visualisations, made easy.☆14Aug 7, 2024Updated 2 years ago
- Data Governance app for Splunk☆12Oct 19, 2023Updated 2 years ago
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 3 years ago
- ☆16Feb 28, 2025Updated last year