Alternatives and similar repositories for ChemBioMultimodalAutoencoders

Users that are interested in ChemBioMultimodalAutoencoders are comparing it to the libraries listed below

• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆54Updated 4 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆41Updated 9 months ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 4 years ago
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆138Updated last year
• valence-labs / TxPert
  A repository for reproducing experiments from the TxPert paper
  ☆24Updated 2 weeks ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆96Updated 10 months ago
• mims-harvard / ProCyon
  ProCyon: A multimodal foundation model for protein phenotypes
  ☆54Updated last month
• haiyuan-yu-lab / PIONEER
  ☆29Updated last year
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆29Updated 10 months ago
• krishnanlab / obnb
  A Python toolkit for setting up benchmarking dataset using biomedical networks
  ☆22Updated 3 weeks ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆42Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• jiangdada1221 / TEINet
  TEINet: a deep learning framework for prediction of TCR-epitope binding specificity
  ☆16Updated 2 years ago
• AstraZeneca / StarGazer
  StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…
  ☆35Updated 2 years ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• oxpig / saab_plus
  ☆26Updated 6 years ago
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆49Updated 6 months ago
• wikipathways / pywikipathways
  Python Client Package for WikiPathways
  ☆22Updated 3 weeks ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆75Updated 2 years ago
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated 2 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated 3 weeks ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆74Updated 2 years ago
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆63Updated last year
• eternagame / DegScore
  Arnie-based DegScore tool.
  ☆27Updated 3 years ago
• TeamSundar / TransDTI
  TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow
  ☆13Updated 3 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• djwooten / synergy
  Python library for calculting synergy of drug combinations using several drug synergy frameworks
  ☆36Updated last year
• HarveyYan / RNAonGraph
  A repository for neural representational learning of RNA secondary structures
  ☆32Updated 5 years ago
• evanseitz / squid-nn
  surrogate quantitative interpretability for deepnets
  ☆24Updated 4 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆56Updated last year