Knowledge distillation on DNABERT (DistilBERT and MiniLM techniques) for promoter identification.
☆27Nov 3, 2022Updated 3 years ago
Alternatives and similar repositories for Distillation-DNABERT-Promoter
Users that are interested in Distillation-DNABERT-Promoter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Transformer Architecture Based on BERT and 2D Convolutional Neural Network to Identify DNA Enhancers from Sequence Information☆27May 4, 2022Updated 4 years ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated 2 years ago
- ☆21Dec 21, 2022Updated 3 years ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 4 months ago
- ☆14Dec 2, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- ☆30Nov 6, 2022Updated 3 years ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆17Updated this week
- DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome☆777Jan 22, 2026Updated 7 months ago
- A generative adversarial network-based model to generate synthetic RNA sequences to target proteins☆11Sep 2, 2025Updated 11 months ago
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆231Updated this week
- ☆11Aug 17, 2022Updated 4 years ago
- Meta-analysis of drug target evidence in single-cell data☆17Oct 22, 2024Updated last year
- Data files of promoter and non-promoter sequences used to build CNN models☆13Dec 24, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Mar 16, 2020Updated 6 years ago
- DNN-based small variant caller☆12May 2, 2022Updated 4 years ago
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆11Jan 20, 2022Updated 4 years ago
- Genome scale metabolic models in SBML format☆11Nov 16, 2021Updated 4 years ago
- ☆11Oct 21, 2022Updated 3 years ago
- Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding☆17Sep 11, 2025Updated 11 months ago
- ☆12Mar 16, 2024Updated 2 years ago
- WordPress plugin that makes building analytics friendly links quick and easy.☆11Aug 15, 2026Updated 2 weeks ago
- A script to run HLA typing tools from next generation sequencing data☆12Jan 4, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- scDNAm-GPM: A Generative Language Mamba for Analyzing Single-Cell Whole-Genome Bisulfite Sequencing☆20Aug 7, 2026Updated 3 weeks ago
- Foundation Models for Genomics & Transcriptomics☆913Feb 24, 2026Updated 6 months ago
- A Mendelian approach to variant effect prediction built in keras☆22Aug 22, 2026Updated last week
- zig build add-on (add more toolchains [LLVM-based] support)☆14May 5, 2025Updated last year
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 10 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆513Jan 1, 2026Updated 7 months ago
- A Nextflow workflow for HLA typing using HLA-HD☆15Jul 3, 2024Updated 2 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 3 years ago
- This is a LaTeX template for JAMIA.☆28May 4, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆12Oct 4, 2021Updated 4 years ago
- ☆10Dec 11, 2024Updated last year
- A Multi-Modal AI Copilot for Single-Cell Analysis with Instruction Following☆33Jan 15, 2025Updated last year
- ☆15Mar 15, 2023Updated 3 years ago
- SHApe simulation with graph KERnels☆10May 17, 2021Updated 5 years ago
- Blog posts, mostly about Rust.☆13Jun 7, 2021Updated 5 years ago
- Code accompanying the manuscript "Broad transcriptomic dysregulation across the cerebral cortex in ASD".☆14Aug 10, 2022Updated 4 years ago