Knowledge distillation on DNABERT (DistilBERT and MiniLM techniques) for promoter identification.
☆26Nov 3, 2022Updated 3 years ago
Alternatives and similar repositories for Distillation-DNABERT-Promoter
Users that are interested in Distillation-DNABERT-Promoter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Transformer Architecture Based on BERT and 2D Convolutional Neural Network to Identify DNA Enhancers from Sequence Information☆27May 4, 2022Updated 4 years ago
- ☆14Dec 2, 2024Updated last year
- ☆21Dec 21, 2022Updated 3 years ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- Data files of promoter and non-promoter sequences used to build CNN models☆13Dec 24, 2016Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome☆752Jan 22, 2026Updated 4 months ago
- A generative adversarial network-based model to generate synthetic RNA sequences to target proteins☆11Sep 2, 2025Updated 9 months ago
- scDNAm-GPT: A Foundation Model for Analyzing Single-Cell Whole-Genome Bisulfite Sequencing☆19Nov 30, 2025Updated 6 months ago
- ☆10Aug 17, 2022Updated 3 years ago
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆228Jun 2, 2026Updated last week
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated 2 years ago
- Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding☆16Sep 11, 2025Updated 8 months ago
- ☆11Mar 16, 2020Updated 6 years ago
- Genome scale metabolic models in SBML format☆11Nov 16, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DNN-based small variant caller☆12May 2, 2022Updated 4 years ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆15May 29, 2026Updated last week
- The code of "Deep Regression Representation Learning with Topology" in ICML 2024☆14Jul 4, 2024Updated last year
- ☆37Feb 20, 2026Updated 3 months ago
- [NeurIPS 2025] Official code for "Tropical Attention: Neural Algorithmic Reasoning for Combinatorial Algorithms"☆30May 21, 2026Updated 2 weeks ago
- ☆12Mar 16, 2024Updated 2 years ago
- ☆11Oct 21, 2022Updated 3 years ago
- A script to run HLA typing tools from next generation sequencing data☆12Jan 4, 2023Updated 3 years ago
- WordPress plugin that makes building analytics friendly links quick and easy.☆12Mar 29, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆16Oct 17, 2024Updated last year
- Notebooks for docarray, Jina, Finetuner, and other products from Jina AI☆12Mar 31, 2022Updated 4 years ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆493Jan 1, 2026Updated 5 months ago
- zig build add-on (add more toolchains [LLVM-based] support)☆14May 5, 2025Updated last year
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- CellRank 2's reproducibility repository.☆15Sep 4, 2024Updated last year
- ☆12Mar 20, 2024Updated 2 years ago
- ☆12Oct 4, 2021Updated 4 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆17Feb 12, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- This is a LaTeX template for JAMIA.☆24May 4, 2024Updated 2 years ago
- code to run sei and obtain sei and sequence class predictions☆115Dec 20, 2022Updated 3 years ago
- ☆10Dec 11, 2024Updated last year
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 7 months ago
- Matrix Product State algorithm for computing characters of the symmetric group S_n☆11Sep 26, 2025Updated 8 months ago
- ☆14Feb 21, 2023Updated 3 years ago
- Just messing around with implementing data structures in Rust.☆15May 23, 2025Updated last year